Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SMARCB1Q12824 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.04□□□□□ -2.08
SMARCB1Q12824 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.04□□□□□ -2.08
SMARCB1Q12824 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.04□□□□□ -2.08
SMARCB1Q12824 AC110588.1-201ENST00000559699 137 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 AC110491.1-201ENST00000562191 2010 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SMARCB1Q12824 AC005261.5-201ENST00000596280 355 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 AC092354.1-201ENST00000606057 376 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 AL589743.7-201ENST00000612637 233 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 DUSP12P1-201ENST00000612874 516 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 AC122133.1-201ENST00000613964 233 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.04□□□□□ -2.08
SMARCB1Q12824 SDR42E1P4-201ENST00000620894 481 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.04□□□□□ -2.08
SMARCB1Q12824 AL589994.2-201ENST00000621124 579 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 AC079416.3-201ENST00000624479 549 ntBASIC2.04□□□□□ -2.08
SMARCB1Q12824 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMARCB1Q12824 RNU5E-1-201ENST00000362477 120 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 RNU4-21P-201ENST00000362802 126 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 Z98749.2-208ENST00000381646 500 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 Y_RNA.534-201ENST00000384599 112 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 RNU6-750P-201ENST00000390946 107 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMARCB1Q12824 RPS12P24-201ENST00000412619 387 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC003685.2-201ENST00000422795 395 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AL365203.2-201ENST00000423444 196 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AL589872.1-201ENST00000426602 288 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 SNORA31.6-201ENST00000516241 130 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 RNU6-1092P-201ENST00000516955 87 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 RNU6-548P-201ENST00000517083 115 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC084851.1-201ENST00000529105 249 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC011494.1-201ENST00000596454 237 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC008749.1-201ENST00000597650 306 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC073544.2-201ENST00000601155 540 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC112191.3-201ENST00000604371 277 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC130324.3-201ENST00000614165 542 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AP001486.3-201ENST00000615334 372 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC091304.6-201ENST00000619761 202 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.03□□□□□ -2.08
SMARCB1Q12824 MTND5P42-201ENST00000637720 498 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMARCB1Q12824 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SMARCB1Q12824 AC080128.1-201ENST00000474389 1917 ntBASIC2.03□□□□□ -2.08
SMARCB1Q12824 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
SMARCB1Q12824 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 MTND4P27-201ENST00000450813 1354 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCB1Q12824 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCB1Q12824 HSPE1P11-201ENST00000339579 310 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 RNU6-482P-201ENST00000391068 107 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 NDUFS5P4-201ENST00000412983 318 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 CYCSP46-201ENST00000423569 204 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 MTND4P20-201ENST00000424125 869 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AL353729.1-201ENST00000425044 720 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC098831.1-201ENST00000440661 216 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 UBE2D3P4-201ENST00000441973 436 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 USP9YP12-201ENST00000450481 570 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC010587.1-201ENST00000505809 469 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC117522.2-201ENST00000510049 657 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 MTND1P22-201ENST00000510572 951 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 FABP5P5-201ENST00000515537 406 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 OR5B19P-201ENST00000531766 928 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC145350.1-201ENST00000567426 208 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AL451064.1-201ENST00000607718 471 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC091304.9-201ENST00000612091 226 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 MIR6845-201ENST00000613182 61 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 AC009878.1-201ENST00000621819 340 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 Z99571.1-201ENST00000636677 394 ntBASIC2.02□□□□□ -2.09
SMARCB1Q12824 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.02□□□□□ -2.09
SMARCB1Q12824 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SMARCB1Q12824 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
SMARCB1Q12824 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMARCB1Q12824 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMARCB1Q12824 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
SMARCB1Q12824 RNU6-946P-201ENST00000383878 107 ntBASIC2.01□□□□□ -2.09
SMARCB1Q12824 SNORA75B-201ENST00000384053 137 ntBASIC2.01□□□□□ -2.09
SMARCB1Q12824 RNU6-658P-201ENST00000384606 106 ntBASIC2.01□□□□□ -2.09
SMARCB1Q12824 RNU6-817P-201ENST00000391083 104 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms