Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CPSF1Q10570 Y_RNA.85-201ENST00000363014 111 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 Y_RNA.178-201ENST00000363832 102 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.76□□□□□ -2.29
CPSF1Q10570 USP9YP24-201ENST00000434374 697 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 MTCO3P17-201ENST00000443775 513 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 FCF1P6-201ENST00000456841 595 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 RPL22P13-201ENST00000493291 347 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.76□□□□□ -2.29
CPSF1Q10570 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.76□□□□□ -2.29
CPSF1Q10570 SNORD19.2-201ENST00000516978 73 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.76□□□□□ -2.29
CPSF1Q10570 AP003066.2-201ENST00000529375 555 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.76□□□□□ -2.29
CPSF1Q10570 AC006199.1-201ENST00000548728 219 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 AC009268.1-201ENST00000561352 1203 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 MIR8074-201ENST00000615081 81 ntBASIC0.76□□□□□ -2.29
CPSF1Q10570 C1DP1-201ENST00000426049 402 ntBASIC0.75□□□□□ -2.29
CPSF1Q10570 AC092634.2-201ENST00000428146 1010 ntBASIC0.75□□□□□ -2.29
CPSF1Q10570 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.75□□□□□ -2.29
CPSF1Q10570 MTCYBP16-201ENST00000509187 1129 ntBASIC0.75□□□□□ -2.29
CPSF1Q10570 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.75□□□□□ -2.29
CPSF1Q10570 AL671309.1-201ENST00000603750 544 ntBASIC0.75□□□□□ -2.29
CPSF1Q10570 AL355472.4-201ENST00000610233 626 ntBASIC0.75□□□□□ -2.29
CPSF1Q10570 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.75□□□□□ -2.29
CPSF1Q10570 RBBP8P1-201ENST00000449447 1844 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 SNORA51.6-201ENST00000384151 125 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 RNU2-36P-201ENST00000410361 191 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 USP9YP19-201ENST00000412165 485 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 USP9YP13-201ENST00000417797 480 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 AL606490.4-201ENST00000423117 127 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 AL358176.2-201ENST00000425769 204 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.74□□□□□ -2.29
CPSF1Q10570 snoU13.9-201ENST00000458927 103 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 AC018868.1-201ENST00000491307 315 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 Y_RNA.681-201ENST00000516445 113 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 RNU6-229P-201ENST00000516614 102 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 AC005832.3-201ENST00000537929 631 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.74□□□□□ -2.29
CPSF1Q10570 AC004817.2-201ENST00000561794 651 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 AL031775.1-201ENST00000607014 887 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 AC092953.2-201ENST00000608000 699 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 AL391597.1-201ENST00000618707 694 ntBASIC0.74□□□□□ -2.29
CPSF1Q10570 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
CPSF1Q10570 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
CPSF1Q10570 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CPSF1Q10570 MIR29C-201ENST00000385231 88 ntBASIC0.73□□□□□ -2.29
CPSF1Q10570 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CPSF1Q10570 RNU11-3P-201ENST00000391111 133 ntBASIC0.73□□□□□ -2.29
CPSF1Q10570 AL109755.1-201ENST00000401791 649 ntBASIC0.73□□□□□ -2.29
CPSF1Q10570 NDUFS5P4-201ENST00000412983 318 ntBASIC0.73□□□□□ -2.29
CPSF1Q10570 AL161651.1-201ENST00000440882 223 ntBASIC0.73□□□□□ -2.29
CPSF1Q10570 KATNBL1P6-201ENST00000453433 915 ntBASIC0.73□□□□□ -2.29
CPSF1Q10570 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.73□□□□□ -2.29
CPSF1Q10570 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.73□□□□□ -2.29
CPSF1Q10570 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.73□□□□□ -2.29
CPSF1Q10570 AL512506.2-201ENST00000624472 458 ntBASIC0.73□□□□□ -2.29
CPSF1Q10570 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.73□□□□□ -2.29
CPSF1Q10570 Y_RNA.68-201ENST00000362881 102 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 RNA5SP62-201ENST00000363457 110 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CPSF1Q10570 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CPSF1Q10570 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.72□□□□□ -2.29
CPSF1Q10570 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF1Q10570 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.72□□□□□ -2.29
CPSF1Q10570 COX7A2P2-201ENST00000505291 250 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 SMURF2P1-201ENST00000514992 481 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 RNU6-322P-201ENST00000516010 103 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 RNA5SP121-201ENST00000516537 101 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 CYB5AP5-201ENST00000549779 389 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 BNIP3P23-201ENST00000599655 511 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 MTND1P37-201ENST00000636562 264 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 SEC63P2-201ENST00000503863 1939 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 RNU5E-1-201ENST00000362477 120 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 AL121978.1-201ENST00000402778 359 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 RNU6-564P-201ENST00000410983 104 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 AC097463.2-201ENST00000421074 142 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF1Q10570 AL591043.1-201ENST00000432461 424 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF1Q10570 AC006512.1-201ENST00000468816 291 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 BOLA3P3-201ENST00000505182 232 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 RNU7-40P-201ENST00000516397 64 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.72□□□□□ -2.29
CPSF1Q10570 AC124293.1-201ENST00000530034 493 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 AP003122.4-201ENST00000530980 758 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CPSF1Q10570 MIR4653-201ENST00000585107 83 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 AL121890.5-201ENST00000620848 304 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 AL590396.2-201ENST00000636511 1041 ntBASIC0.72□□□□□ -2.29
CPSF1Q10570 Z75746.1-201ENST00000440243 2080 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 OR5T3-201ENST00000303059 1023 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CPSF1Q10570 RNU6-271P-201ENST00000363858 105 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 RNU6-891P-201ENST00000384280 111 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 MIR92A1-201ENST00000385233 78 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 RPL23AP32-201ENST00000395315 459 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 RNA5SP501-201ENST00000410990 112 ntBASIC0.71□□□□□ -2.3
CPSF1Q10570 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms