Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MIR1295A-201ENST00000408463 79 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 RPS24P7-201ENST00000416921 246 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 AL449283.1-202ENST00000418249 604 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.01□□□□□ -2.41
TFF3Q07654 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC-0.01□□□□□ -2.41
TFF3Q07654 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.01□□□□□ -2.41
TFF3Q07654 HAR1A.1-201ENST00000459583 118 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 LARP7P4-201ENST00000481075 878 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 SNORA70.16-201ENST00000516390 95 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 OR5AK1P-201ENST00000524837 922 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 MED28P6-201ENST00000558776 231 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 AC136619.2-201ENST00000563361 631 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 ELOCP5-201ENST00000604924 333 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 AC017083.3-201ENST00000609955 700 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 AC093913.1-201ENST00000614178 329 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
TFF3Q07654 OR5T3-201ENST00000303059 1023 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 RNU1-119P-201ENST00000391122 165 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
TFF3Q07654 AC111000.5-201ENST00000506559 1178 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
TFF3Q07654 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.02□□□□□ -2.41
TFF3Q07654 AC105224.1-201ENST00000587055 421 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 AC069114.2-201ENST00000604699 304 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 BX322635.1-201ENST00000605804 496 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 AC055764.2-201ENST00000610089 670 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 AC104465.1-201ENST00000611365 139 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.02□□□□□ -2.41
TFF3Q07654 AC013470.4-201ENST00000619978 986 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 MIR6086-201ENST00000638065 55 ntBASIC-0.02□□□□□ -2.41
TFF3Q07654 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
TFF3Q07654 AC090625.1-201ENST00000357130 210 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 RNU1-23P-201ENST00000363361 144 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 SNORD1A-201ENST00000364968 72 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
TFF3Q07654 RNU6-1197P-201ENST00000391183 107 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 RPS3AP36-201ENST00000398190 775 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 DSTNP4-201ENST00000399472 474 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 AL356776.1-201ENST00000406574 447 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 AC114482.1-201ENST00000418010 247 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 AC099677.1-201ENST00000420575 175 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC-0.03□□□□□ -2.41
TFF3Q07654 PDCD5P2-201ENST00000507570 312 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 MIR4636-201ENST00000582271 80 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 MIR4305-201ENST00000583252 102 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 AL009028.1-201ENST00000604895 802 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC-0.03□□□□□ -2.41
TFF3Q07654 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.03□□□□□ -2.41
TFF3Q07654 AC073308.1-201ENST00000623696 305 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 AC015726.3-201ENST00000624501 418 ntBASIC-0.03□□□□□ -2.41
TFF3Q07654 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
TFF3Q07654 SNORD33-201ENST00000362761 85 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 RNU6-263P-201ENST00000363811 107 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 U3.9-201ENST00000363823 204 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 RNU6-173P-201ENST00000364215 104 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 AC092634.6-201ENST00000418558 192 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 AC006548.1-201ENST00000427470 102 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 AL669831.1-202ENST00000428504 417 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 AL606489.2-201ENST00000433886 234 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 GTF2IP13-201ENST00000438487 386 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.04□□□□□ -2.42
TFF3Q07654 AC098869.1-201ENST00000481627 292 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 AC108740.1-201ENST00000498629 225 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.04□□□□□ -2.42
TFF3Q07654 RNA5SP337-201ENST00000517007 109 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 NRON-201ENST00000517270 370 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.04□□□□□ -2.42
TFF3Q07654 AC091489.2-201ENST00000566263 604 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 AL138963.2-201ENST00000605137 226 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 CR381572.1-201ENST00000625098 102 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
TFF3Q07654 AC100821.1-201ENST00000523153 2479 ntBASIC-0.04□□□□□ -2.42
TFF3Q07654 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
TFF3Q07654 RNU6-945P-201ENST00000383947 107 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 RNU6-317P-201ENST00000384031 107 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 RNU6-439P-201ENST00000384188 106 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 RNU6-532P-201ENST00000384318 107 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC-0.05□□□□□ -2.42
TFF3Q07654 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.05□□□□□ -2.42
TFF3Q07654 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC-0.05□□□□□ -2.42
TFF3Q07654 AC006512.1-201ENST00000468816 291 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 SSR3-208ENST00000496050 579 ntTSL 4 BASIC-0.05□□□□□ -2.42
TFF3Q07654 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.05□□□□□ -2.42
TFF3Q07654 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC-0.05□□□□□ -2.42
TFF3Q07654 CYP3A52P-201ENST00000563326 91 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 AC002400.1-201ENST00000569310 726 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 SNORA77B-201ENST00000578179 125 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC-0.05□□□□□ -2.42
TFF3Q07654 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC-0.05□□□□□ -2.42
TFF3Q07654 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 OR5H6-203ENST00000642105 978 ntBASIC-0.05□□□□□ -2.42
TFF3Q07654 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
TFF3Q07654 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
TFF3Q07654 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 SNORD114-24-201ENST00000365029 72 ntBASIC-0.06□□□□□ -2.42
TFF3Q07654 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms