Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RPL23AP49-201ENST00000492925 468 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX6-1P78426 Y_RNA.708-201ENST00000516950 96 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 Y_RNA.718-201ENST00000517110 102 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX6-1P78426 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX6-1P78426 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX6-1P78426 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 AL133215.3-201ENST00000609801 448 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.42□□□□□ -1.86
NKX6-1P78426 PLCE1P1-201ENST00000622094 305 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 U4.7-201ENST00000638126 106 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.42□□□□□ -1.86
NKX6-1P78426 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX6-1P78426 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX6-1P78426 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX6-1P78426 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
NKX6-1P78426 CDC27P3-201ENST00000635418 1910 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 TNPO1P3-201ENST00000436471 2662 ntBASIC3.42□□□□□ -1.86
NKX6-1P78426 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NKX6-1P78426 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NKX6-1P78426 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.42□□□□□ -1.86
NKX6-1P78426 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 RNU6-527P-201ENST00000363425 104 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 RNU1-100P-201ENST00000365255 165 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX6-1P78426 RNY4P36-201ENST00000391116 96 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 Z99755.1-201ENST00000414048 380 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 RPS29P4-201ENST00000414733 161 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 AL117339.3-201ENST00000418733 162 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 HMGN2P31-201ENST00000432430 273 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 AC083863.1-201ENST00000438811 231 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 AC012308.1-201ENST00000451232 178 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 Y_RNA.653-201ENST00000459091 95 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 AC114801.2-201ENST00000503825 781 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX6-1P78426 SMURF2P1-201ENST00000514992 481 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 SNORA43.2-201ENST00000516652 128 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 RNA5SP179-201ENST00000517284 121 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NKX6-1P78426 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX6-1P78426 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX6-1P78426 APOOP3-201ENST00000536787 586 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 TRAV32-201ENST00000553993 340 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 AL121821.2-201ENST00000556081 394 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 MIR3200-201ENST00000580767 85 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.41□□□□□ -1.86
NKX6-1P78426 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
NKX6-1P78426 AC020895.1-201ENST00000595362 272 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX6-1P78426 AC009314.1-201ENST00000603871 304 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 AC091167.4-201ENST00000605079 184 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 AC018889.1-201ENST00000605372 397 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.41□□□□□ -1.86
NKX6-1P78426 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NKX6-1P78426 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX6-1P78426 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.41□□□□□ -1.86
NKX6-1P78426 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NKX6-1P78426 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NKX6-1P78426 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NKX6-1P78426 AC010680.1-201ENST00000590024 3590 ntBASIC3.4□□□□□ -1.86
NKX6-1P78426 RNU6-858P-201ENST00000362436 107 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 RNA5SP97-201ENST00000365006 84 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX6-1P78426 MIR591-201ENST00000385290 95 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 SNORA3.3-201ENST00000408712 125 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 RNU6-1050P-201ENST00000410388 107 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 RNU6-325P-201ENST00000411132 105 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX6-1P78426 AC245291.1-201ENST00000419501 328 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AL159169.1-201ENST00000421119 127 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX6-1P78426 AC087650.1-201ENST00000431445 468 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AL591043.1-201ENST00000432461 424 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 RPS15AP5-201ENST00000436276 388 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX6-1P78426 AC013470.1-201ENST00000453438 462 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AC116655.1-201ENST00000508324 901 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 RNU6-1170P-201ENST00000515974 106 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 SNORA31.21-201ENST00000517180 77 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX6-1P78426 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.4□□□□□ -1.87
NKX6-1P78426 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.4□□□□□ -1.87
NKX6-1P78426 AL163153.1-201ENST00000554223 283 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AC103996.1-201ENST00000555468 102 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AC044792.1-201ENST00000593294 196 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AC018462.2-201ENST00000605375 395 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AC011890.2-201ENST00000613393 294 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AL157817.1-201ENST00000614264 790 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AL773545.4-201ENST00000637262 310 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 AL513478.4-201ENST00000641636 310 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
NKX6-1P78426 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NKX6-1P78426 AC004944.1-201ENST00000517807 3059 ntBASIC3.4□□□□□ -1.87
NKX6-1P78426 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.39□□□□□ -1.87
NKX6-1P78426 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NKX6-1P78426 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NKX6-1P78426 MTND5P1-201ENST00000445440 1375 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms