Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RN7SKP58-201ENST00000411010 305 ntBASIC2.58□□□□□ -2
CX3CL1P78423 RNU6-373P-201ENST00000411247 98 ntBASIC2.58□□□□□ -2
CX3CL1P78423 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.58□□□□□ -2
CX3CL1P78423 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.58□□□□□ -2
CX3CL1P78423 RBMX2P4-201ENST00000441256 376 ntBASIC2.58□□□□□ -2
CX3CL1P78423 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.58□□□□□ -2
CX3CL1P78423 PRSS3P4-201ENST00000453323 162 ntBASIC2.58□□□□□ -2
CX3CL1P78423 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.58□□□□□ -2
CX3CL1P78423 AL590639.1-201ENST00000456484 337 ntBASIC2.58□□□□□ -2
CX3CL1P78423 AC110794.1-201ENST00000505816 425 ntBASIC2.58□□□□□ -2
CX3CL1P78423 AC116655.1-201ENST00000508324 901 ntBASIC2.58□□□□□ -2
CX3CL1P78423 MRPS36P2-201ENST00000512569 299 ntBASIC2.58□□□□□ -2
CX3CL1P78423 SCARNA20.6-201ENST00000517251 106 ntBASIC2.58□□□□□ -2
CX3CL1P78423 RPL7P20-201ENST00000520308 745 ntBASIC2.58□□□□□ -2
CX3CL1P78423 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.58□□□□□ -2
CX3CL1P78423 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.58□□□□□ -2
CX3CL1P78423 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.58□□□□□ -2
CX3CL1P78423 AC020895.1-201ENST00000595362 272 ntBASIC2.58□□□□□ -2
CX3CL1P78423 AC091152.3-201ENST00000604227 325 ntBASIC2.58□□□□□ -2
CX3CL1P78423 AC123912.5-201ENST00000605470 343 ntBASIC2.58□□□□□ -2
CX3CL1P78423 AC012314.7-201ENST00000619693 93 ntBASIC2.58□□□□□ -2
CX3CL1P78423 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.58□□□□□ -2
CX3CL1P78423 Z69720.2-201ENST00000624755 279 ntBASIC2.58□□□□□ -2
CX3CL1P78423 SCARNA4-202ENST00000625402 129 ntBASIC2.58□□□□□ -2
CX3CL1P78423 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CX3CL1P78423 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CX3CL1P78423 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.57□□□□□ -2
CX3CL1P78423 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CX3CL1P78423 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.57□□□□□ -2
CX3CL1P78423 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.57□□□□□ -2
CX3CL1P78423 RNU6-942P-201ENST00000363002 107 ntBASIC2.57□□□□□ -2
CX3CL1P78423 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CX3CL1P78423 RAP1BP3-201ENST00000407180 549 ntBASIC2.57□□□□□ -2
CX3CL1P78423 RN7SKP123-201ENST00000410732 291 ntBASIC2.57□□□□□ -2
CX3CL1P78423 RNA5SP229-201ENST00000410809 99 ntBASIC2.57□□□□□ -2
CX3CL1P78423 BMS1P22-201ENST00000414726 313 ntBASIC2.57□□□□□ -2
CX3CL1P78423 RPL30P16-201ENST00000419341 429 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.57□□□□□ -2
CX3CL1P78423 RPL7P37-201ENST00000425095 738 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.57□□□□□ -2
CX3CL1P78423 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.57□□□□□ -2
CX3CL1P78423 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.57□□□□□ -2
CX3CL1P78423 AC115115.1-201ENST00000449927 248 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.57□□□□□ -2
CX3CL1P78423 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.57□□□□□ -2
CX3CL1P78423 RN7SL75P-201ENST00000461926 281 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.57□□□□□ -2
CX3CL1P78423 AC083904.1-201ENST00000487828 231 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.57□□□□□ -2
CX3CL1P78423 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC113155.1-201ENST00000511141 769 ntBASIC2.57□□□□□ -2
CX3CL1P78423 SNORA19.2-201ENST00000516013 114 ntBASIC2.57□□□□□ -2
CX3CL1P78423 SNORA14.1-201ENST00000516113 141 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AP004607.1-201ENST00000524456 203 ntBASIC2.57□□□□□ -2
CX3CL1P78423 CYCSP27-201ENST00000527643 293 ntBASIC2.57□□□□□ -2
CX3CL1P78423 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.57□□□□□ -2
CX3CL1P78423 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.57□□□□□ -2
CX3CL1P78423 APOOP1-201ENST00000604695 592 ntBASIC2.57□□□□□ -2
CX3CL1P78423 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.57□□□□□ -2
CX3CL1P78423 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.57□□□□□ -2
CX3CL1P78423 AC084757.4-201ENST00000616350 526 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.57□□□□□ -2
CX3CL1P78423 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC090617.10-201ENST00000624308 134 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC091903.1-201ENST00000624322 454 ntBASIC2.57□□□□□ -2
CX3CL1P78423 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
CX3CL1P78423 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CX3CL1P78423 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CX3CL1P78423 AL353743.1-202ENST00000431724 1695 ntBASIC2.57□□□□□ -2
CX3CL1P78423 AC121333.1-201ENST00000567488 2709 ntBASIC2.56□□□□□ -2
CX3CL1P78423 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CX3CL1P78423 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CX3CL1P78423 AC099654.7-201ENST00000635788 2127 ntBASIC2.56□□□□□ -2
CX3CL1P78423 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CX3CL1P78423 FAM35CP-201ENST00000554755 2470 ntBASIC2.56□□□□□ -2
CX3CL1P78423 Y_RNA.157-201ENST00000363638 102 ntBASIC2.56□□□□□ -2
CX3CL1P78423 RNA5SP72-201ENST00000364442 117 ntBASIC2.56□□□□□ -2
CX3CL1P78423 RNU6-1283P-201ENST00000365314 105 ntBASIC2.56□□□□□ -2
CX3CL1P78423 U3.19-201ENST00000390893 196 ntBASIC2.56□□□□□ -2
CX3CL1P78423 RNA5SP171-201ENST00000391071 115 ntBASIC2.56□□□□□ -2
CX3CL1P78423 FTH1P15-201ENST00000406984 280 ntBASIC2.56□□□□□ -2
CX3CL1P78423 PTGES3P4-201ENST00000426243 356 ntBASIC2.56□□□□□ -2
CX3CL1P78423 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.56□□□□□ -2
CX3CL1P78423 AL353705.1-201ENST00000433468 480 ntBASIC2.56□□□□□ -2
CX3CL1P78423 AC092473.1-201ENST00000441098 221 ntBASIC2.56□□□□□ -2
CX3CL1P78423 HIGD1AP2-201ENST00000446367 280 ntBASIC2.56□□□□□ -2
CX3CL1P78423 RPS26P21-201ENST00000475397 348 ntBASIC2.56□□□□□ -2
CX3CL1P78423 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.56□□□□□ -2
CX3CL1P78423 AC079140.5-201ENST00000507882 310 ntBASIC2.56□□□□□ -2
CX3CL1P78423 ACA59.2-201ENST00000517061 156 ntBASIC2.56□□□□□ -2
CX3CL1P78423 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.56□□□□□ -2
CX3CL1P78423 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.56□□□□□ -2
CX3CL1P78423 AC007151.1-201ENST00000572774 483 ntBASIC2.56□□□□□ -2
CX3CL1P78423 AC011471.1-201ENST00000585766 187 ntBASIC2.56□□□□□ -2
CX3CL1P78423 AC060780.3-201ENST00000589464 80 ntBASIC2.56□□□□□ -2
CX3CL1P78423 AL391813.1-201ENST00000603098 260 ntBASIC2.56□□□□□ -2
CX3CL1P78423 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.56□□□□□ -2
CX3CL1P78423 AC006504.8-201ENST00000621046 635 ntBASIC2.56□□□□□ -2
CX3CL1P78423 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.56□□□□□ -2
CX3CL1P78423 AC004944.1-201ENST00000517807 3059 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms