Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.78□□□□□ -2.28
ABCA4P78363 MTND5P11-201ENST00000511037 1812 ntBASIC0.78□□□□□ -2.29
ABCA4P78363 SNORA25.8-201ENST00000364831 128 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA4P78363 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.77□□□□□ -2.29
ABCA4P78363 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.77□□□□□ -2.29
ABCA4P78363 RPS27P1-201ENST00000450552 247 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 MTND2P24-201ENST00000453434 806 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 AC018437.1-201ENST00000492214 406 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA4P78363 AC004853.1-201ENST00000604902 698 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 AC004009.2-201ENST00000623016 728 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
ABCA4P78363 AC068050.1-201ENST00000394891 380 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 MIR936-201ENST00000401264 98 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 AL109755.1-201ENST00000401791 649 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.77□□□□□ -2.29
ABCA4P78363 AC092648.1-201ENST00000425870 423 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA4P78363 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA4P78363 AC112771.1-201ENST00000463581 102 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 RPL22P13-201ENST00000493291 347 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.77□□□□□ -2.29
ABCA4P78363 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.77□□□□□ -2.29
ABCA4P78363 RNU11-2P-201ENST00000516898 142 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 AC103833.1-201ENST00000517442 172 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA4P78363 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA4P78363 AC091965.5-201ENST00000624785 342 ntBASIC0.77□□□□□ -2.29
ABCA4P78363 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA4P78363 Y_RNA.412-201ENST00000384001 104 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
ABCA4P78363 RPL31P54-201ENST00000429803 370 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC0.76□□□□□ -2.29
ABCA4P78363 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.76□□□□□ -2.29
ABCA4P78363 HMGB1P36-201ENST00000487709 576 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.76□□□□□ -2.29
ABCA4P78363 RNA5SP290-201ENST00000517133 127 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.76□□□□□ -2.29
ABCA4P78363 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA4P78363 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA4P78363 BNIP3P23-201ENST00000599655 511 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 DUSP12P1-201ENST00000612874 516 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AL163051.2-201ENST00000618976 735 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AP003476.1-201ENST00000623984 516 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
ABCA4P78363 SGO1P1-201ENST00000603525 1447 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AC127391.1-201ENST00000411737 98 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 MTND2P5-201ENST00000432656 1006 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA4P78363 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.76□□□□□ -2.29
ABCA4P78363 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AC090079.2-201ENST00000575289 768 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 MIR4422-201ENST00000581938 83 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AL133445.2-201ENST00000611191 527 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AC022202.1-201ENST00000613515 211 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AC007490.1-201ENST00000624321 703 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 AL512506.2-201ENST00000624472 458 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
ABCA4P78363 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.76□□□□□ -2.29
ABCA4P78363 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.75□□□□□ -2.29
ABCA4P78363 ZNF29P-201ENST00000225587 168 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AL133264.1-201ENST00000407157 562 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 RNU2-41P-201ENST00000410991 178 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA4P78363 TOMM22P2-201ENST00000430735 237 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 VN1R10P-201ENST00000447106 875 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ABCA4P78363 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.75□□□□□ -2.29
ABCA4P78363 TPT1P8-201ENST00000510120 555 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.75□□□□□ -2.29
ABCA4P78363 AC125611.1-201ENST00000549563 229 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.75□□□□□ -2.29
ABCA4P78363 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.75□□□□□ -2.29
ABCA4P78363 AL139344.1-201ENST00000605228 195 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.75□□□□□ -2.29
ABCA4P78363 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
ABCA4P78363 RNU6-1235P-201ENST00000384559 107 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA4P78363 AC097463.2-201ENST00000421074 142 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 PPP1R11P2-201ENST00000423543 382 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AL353706.1-201ENST00000436728 494 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 OFD1P3Y-201ENST00000453312 783 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 RNU6-498P-201ENST00000459468 107 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.75□□□□□ -2.29
ABCA4P78363 RNU6-840P-201ENST00000517275 65 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 LARP7P2-201ENST00000575306 125 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA4P78363 FAM71BP1-201ENST00000604431 523 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 AC004805.2-201ENST00000605382 482 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 MTND1P37-201ENST00000636562 264 ntBASIC0.75□□□□□ -2.29
ABCA4P78363 MTND4P12-201ENST00000498999 1377 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
ABCA4P78363 AL390862.1-201ENST00000635467 1469 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 RNU6-338P-201ENST00000383888 105 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 MIR218-1-201ENST00000384999 110 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 MTCO3P1-205ENST00000422088 832 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.74□□□□□ -2.29
ABCA4P78363 JTBP1-201ENST00000441314 247 ntBASIC0.74□□□□□ -2.29
ABCA4P78363 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms