Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.56□□□□□ -2.32
UBA52P62987 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.56□□□□□ -2.32
UBA52P62987 AL049874.1-201ENST00000489560 388 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AC117454.1-201ENST00000491120 168 ntBASIC0.56□□□□□ -2.32
UBA52P62987 RPL22P13-201ENST00000493291 347 ntBASIC0.56□□□□□ -2.32
UBA52P62987 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
UBA52P62987 SCARNA16.2-201ENST00000516520 172 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AC103833.1-201ENST00000517442 172 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.56□□□□□ -2.32
UBA52P62987 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
UBA52P62987 LSM6P2-201ENST00000552208 177 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.56□□□□□ -2.32
UBA52P62987 AC073544.2-201ENST00000601155 540 ntBASIC0.56□□□□□ -2.32
UBA52P62987 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.56□□□□□ -2.32
UBA52P62987 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.56□□□□□ -2.32
UBA52P62987 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.56□□□□□ -2.32
UBA52P62987 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
UBA52P62987 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
UBA52P62987 MIR597-201ENST00000384968 97 ntBASIC0.55□□□□□ -2.32
UBA52P62987 RNU2-64P-201ENST00000411315 191 ntBASIC0.55□□□□□ -2.32
UBA52P62987 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.55□□□□□ -2.32
UBA52P62987 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.55□□□□□ -2.32
UBA52P62987 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.55□□□□□ -2.32
UBA52P62987 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.55□□□□□ -2.32
UBA52P62987 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.55□□□□□ -2.32
UBA52P62987 AC067942.3-201ENST00000512025 362 ntBASIC0.55□□□□□ -2.32
UBA52P62987 PSMC1P5-201ENST00000512850 177 ntBASIC0.55□□□□□ -2.32
UBA52P62987 AC104997.1-201ENST00000519761 717 ntBASIC0.55□□□□□ -2.32
UBA52P62987 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.55□□□□□ -2.32
UBA52P62987 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.55□□□□□ -2.32
UBA52P62987 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.55□□□□□ -2.32
UBA52P62987 AC005261.5-201ENST00000596280 355 ntBASIC0.55□□□□□ -2.32
UBA52P62987 BNIP3P27-201ENST00000599991 412 ntBASIC0.55□□□□□ -2.32
UBA52P62987 AL713866.2-201ENST00000603579 219 ntBASIC0.55□□□□□ -2.32
UBA52P62987 AC092953.2-201ENST00000608000 699 ntBASIC0.55□□□□□ -2.32
UBA52P62987 AC096772.1-201ENST00000609146 564 ntBASIC0.55□□□□□ -2.32
UBA52P62987 AL021879.1-201ENST00000611756 288 ntBASIC0.55□□□□□ -2.32
UBA52P62987 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.55□□□□□ -2.32
UBA52P62987 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.55□□□□□ -2.32
UBA52P62987 AC010487.4-201ENST00000637027 61 ntBASIC0.55□□□□□ -2.32
UBA52P62987 AC017104.5-201ENST00000637647 639 ntBASIC0.55□□□□□ -2.32
UBA52P62987 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.55□□□□□ -2.32
UBA52P62987 Y_RNA.374-201ENST00000365606 101 ntBASIC0.54□□□□□ -2.32
UBA52P62987 MIR421-201ENST00000365696 85 ntBASIC0.54□□□□□ -2.32
UBA52P62987 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
UBA52P62987 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
UBA52P62987 RNU2-47P-201ENST00000410649 186 ntBASIC0.54□□□□□ -2.32
UBA52P62987 AC009518.2-201ENST00000418056 731 ntBASIC0.54□□□□□ -2.32
UBA52P62987 BEND7P1-201ENST00000422058 457 ntBASIC0.54□□□□□ -2.32
UBA52P62987 AC139712.2-201ENST00000424302 339 ntBASIC0.54□□□□□ -2.32
UBA52P62987 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.54□□□□□ -2.32
UBA52P62987 AC027119.1-201ENST00000440877 241 ntBASIC0.54□□□□□ -2.32
UBA52P62987 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.54□□□□□ -2.32
UBA52P62987 AC092989.1-201ENST00000481235 277 ntBASIC0.54□□□□□ -2.32
UBA52P62987 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.54□□□□□ -2.32
UBA52P62987 AC145146.1-201ENST00000496370 254 ntBASIC0.54□□□□□ -2.32
UBA52P62987 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.54□□□□□ -2.32
UBA52P62987 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.54□□□□□ -2.32
UBA52P62987 AC104806.1-201ENST00000508720 308 ntBASIC0.54□□□□□ -2.32
UBA52P62987 AC022483.1-201ENST00000514020 567 ntBASIC0.54□□□□□ -2.32
UBA52P62987 AC124293.1-201ENST00000530034 493 ntBASIC0.54□□□□□ -2.32
UBA52P62987 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.54□□□□□ -2.32
UBA52P62987 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.54□□□□□ -2.32
UBA52P62987 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.54□□□□□ -2.32
UBA52P62987 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.54□□□□□ -2.32
UBA52P62987 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.54□□□□□ -2.32
UBA52P62987 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.54□□□□□ -2.32
UBA52P62987 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
UBA52P62987 RNU6-942P-201ENST00000363002 107 ntBASIC0.53□□□□□ -2.32
UBA52P62987 RNU1-23P-201ENST00000363361 144 ntBASIC0.53□□□□□ -2.32
UBA52P62987 SNORD1A-201ENST00000364968 72 ntBASIC0.53□□□□□ -2.32
UBA52P62987 RNU6-152P-201ENST00000384037 107 ntBASIC0.53□□□□□ -2.32
UBA52P62987 RNU6-16P-201ENST00000384385 107 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AC018630.2-202ENST00000422992 927 ntBASIC0.53□□□□□ -2.32
UBA52P62987 RPL7P34-201ENST00000433316 712 ntBASIC0.53□□□□□ -2.32
UBA52P62987 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.53□□□□□ -2.32
UBA52P62987 BOLA3P3-201ENST00000505182 232 ntBASIC0.53□□□□□ -2.32
UBA52P62987 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.53□□□□□ -2.32
UBA52P62987 CYCSP27-201ENST00000527643 293 ntBASIC0.53□□□□□ -2.32
UBA52P62987 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.53□□□□□ -2.32
UBA52P62987 CR383656.7-201ENST00000548164 174 ntBASIC0.53□□□□□ -2.32
UBA52P62987 SNORA77B-201ENST00000578179 125 ntBASIC0.53□□□□□ -2.32
UBA52P62987 MIR4711-201ENST00000578274 70 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AC021171.1-201ENST00000603137 706 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AL671309.1-201ENST00000603750 544 ntBASIC0.53□□□□□ -2.32
UBA52P62987 CYP2C61P-201ENST00000604072 290 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AC091152.3-201ENST00000604227 325 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AC006270.3-201ENST00000605967 1036 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AP005229.2-201ENST00000609980 697 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AC091965.5-201ENST00000624785 342 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AC004808.1-201ENST00000627671 721 ntBASIC0.53□□□□□ -2.32
UBA52P62987 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.53□□□□□ -2.32
UBA52P62987 RNU5E-1-201ENST00000362477 120 ntBASIC0.52□□□□□ -2.33
UBA52P62987 RNU6-386P-201ENST00000362650 107 ntBASIC0.52□□□□□ -2.33
UBA52P62987 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.52□□□□□ -2.33
UBA52P62987 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.52□□□□□ -2.33
UBA52P62987 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.52□□□□□ -2.33
UBA52P62987 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.52□□□□□ -2.33
UBA52P62987 AP001324.2-201ENST00000461163 319 ntBASIC0.52□□□□□ -2.33
UBA52P62987 RNU6-491P-201ENST00000516099 110 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms