Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RPS4XP11-201ENST00000446897 772 ntBASIC0.6□□□□□ -2.31
RPS28P62857 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.6□□□□□ -2.31
RPS28P62857 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.6□□□□□ -2.31
RPS28P62857 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
RPS28P62857 AC145146.1-201ENST00000496370 254 ntBASIC0.6□□□□□ -2.31
RPS28P62857 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC0.6□□□□□ -2.31
RPS28P62857 AC074250.1-201ENST00000511117 192 ntBASIC0.6□□□□□ -2.31
RPS28P62857 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.6□□□□□ -2.31
RPS28P62857 SNORA31.19-201ENST00000517079 126 ntBASIC0.6□□□□□ -2.31
RPS28P62857 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.6□□□□□ -2.31
RPS28P62857 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.6□□□□□ -2.31
RPS28P62857 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.6□□□□□ -2.31
RPS28P62857 AC015688.6-201ENST00000577737 104 ntBASIC0.6□□□□□ -2.31
RPS28P62857 MIR5010-201ENST00000582846 120 ntBASIC0.6□□□□□ -2.31
RPS28P62857 MIR4653-201ENST00000585107 83 ntBASIC0.6□□□□□ -2.31
RPS28P62857 AC026790.2-201ENST00000606282 430 ntBASIC0.6□□□□□ -2.31
RPS28P62857 AC100814.1-201ENST00000606963 623 ntBASIC0.6□□□□□ -2.31
RPS28P62857 AL136981.2-201ENST00000617319 734 ntBASIC0.6□□□□□ -2.31
RPS28P62857 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.6□□□□□ -2.31
RPS28P62857 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC0.6□□□□□ -2.31
RPS28P62857 AC095038.3-201ENST00000634439 195 ntBASIC0.6□□□□□ -2.31
RPS28P62857 MTND4P23-201ENST00000447723 1363 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U6.112-201ENST00000384129 70 ntBASIC0.59□□□□□ -2.31
RPS28P62857 SNORA44-201ENST00000384584 132 ntBASIC0.59□□□□□ -2.31
RPS28P62857 MIR520A-201ENST00000384862 85 ntBASIC0.59□□□□□ -2.31
RPS28P62857 MIR449B-201ENST00000384995 97 ntBASIC0.59□□□□□ -2.31
RPS28P62857 SNORA11.5-201ENST00000408163 128 ntBASIC0.59□□□□□ -2.31
RPS28P62857 RN7SKP32-201ENST00000410167 303 ntBASIC0.59□□□□□ -2.31
RPS28P62857 RNU2-2P-201ENST00000410396 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AC006461.1-201ENST00000412637 326 ntBASIC0.59□□□□□ -2.31
RPS28P62857 RAC1P6-201ENST00000423911 575 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AL356320.1-201ENST00000429616 163 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.59□□□□□ -2.31
RPS28P62857 AL078601.1-201ENST00000444542 271 ntBASIC0.59□□□□□ -2.31
RPS28P62857 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC0.59□□□□□ -2.31
RPS28P62857 RNU7-136P-201ENST00000458819 69 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.59□□□□□ -2.31
RPS28P62857 FAM92A1P2-202ENST00000504766 877 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AC103851.1-201ENST00000506833 274 ntBASIC0.59□□□□□ -2.31
RPS28P62857 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.59□□□□□ -2.31
RPS28P62857 CYCSP23-201ENST00000519781 313 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AP003033.1-201ENST00000527244 415 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AL356057.1-201ENST00000533798 831 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.59□□□□□ -2.31
RPS28P62857 AC137800.2-201ENST00000574375 120 ntBASIC0.59□□□□□ -2.31
RPS28P62857 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.59□□□□□ -2.31
RPS28P62857 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC0.59□□□□□ -2.31
RPS28P62857 AC008739.3-201ENST00000603262 127 ntBASIC0.59□□□□□ -2.31
RPS28P62857 BNIP3P31-201ENST00000604515 566 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AC025754.2-201ENST00000606491 432 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.15-201ENST00000611544 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.16-201ENST00000613119 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.12-201ENST00000613778 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.20-201ENST00000613956 192 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.9-201ENST00000615427 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.11-201ENST00000616345 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.2-201ENST00000616535 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.3-201ENST00000617785 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.19-201ENST00000618602 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 RNU2-1-201ENST00000618664 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.6-201ENST00000619225 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.5-201ENST00000619465 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 AC012314.7-201ENST00000619693 93 ntBASIC0.59□□□□□ -2.31
RPS28P62857 U2.10-201ENST00000620268 191 ntBASIC0.59□□□□□ -2.31
RPS28P62857 MIR1248-201ENST00000629190 106 ntBASIC0.59□□□□□ -2.31
RPS28P62857 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.58□□□□□ -2.32
RPS28P62857 MIR16-2-201ENST00000362117 81 ntBASIC0.58□□□□□ -2.32
RPS28P62857 RNU6-212P-201ENST00000362642 104 ntBASIC0.58□□□□□ -2.32
RPS28P62857 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
RPS28P62857 RNU6-1122P-201ENST00000384449 107 ntBASIC0.58□□□□□ -2.32
RPS28P62857 MIR548B-201ENST00000385247 97 ntBASIC0.58□□□□□ -2.32
RPS28P62857 CBX3P9-201ENST00000402326 552 ntBASIC0.58□□□□□ -2.32
RPS28P62857 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.58□□□□□ -2.32
RPS28P62857 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC0.58□□□□□ -2.32
RPS28P62857 AL669831.1-202ENST00000428504 417 ntBASIC0.58□□□□□ -2.32
RPS28P62857 AL592045.1-201ENST00000429867 352 ntBASIC0.58□□□□□ -2.32
RPS28P62857 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.58□□□□□ -2.32
RPS28P62857 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.58□□□□□ -2.32
RPS28P62857 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC0.58□□□□□ -2.32
RPS28P62857 RPS29P29-201ENST00000456396 171 ntBASIC0.58□□□□□ -2.32
RPS28P62857 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.58□□□□□ -2.32
RPS28P62857 AC092436.1-201ENST00000506450 503 ntBASIC0.58□□□□□ -2.32
RPS28P62857 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.58□□□□□ -2.32
RPS28P62857 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.58□□□□□ -2.32
RPS28P62857 RNU6-551P-201ENST00000516661 103 ntBASIC0.58□□□□□ -2.32
RPS28P62857 RNU6-1092P-201ENST00000516955 87 ntBASIC0.58□□□□□ -2.32
RPS28P62857 RNA5SP503-201ENST00000517047 117 ntBASIC0.58□□□□□ -2.32
RPS28P62857 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.58□□□□□ -2.32
RPS28P62857 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC0.58□□□□□ -2.32
RPS28P62857 AC136624.4-201ENST00000573044 370 ntBASIC0.58□□□□□ -2.32
RPS28P62857 AC136618.2-201ENST00000575091 400 ntBASIC0.58□□□□□ -2.32
RPS28P62857 SNORD53B-201ENST00000577887 78 ntBASIC0.58□□□□□ -2.32
RPS28P62857 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.58□□□□□ -2.32
RPS28P62857 AP003465.2-201ENST00000602571 373 ntBASIC0.58□□□□□ -2.32
RPS28P62857 AC090578.1-201ENST00000604955 591 ntBASIC0.58□□□□□ -2.32
RPS28P62857 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC0.58□□□□□ -2.32
RPS28P62857 MIR6862-1-201ENST00000613016 70 ntBASIC0.58□□□□□ -2.32
RPS28P62857 MIR6862-2-201ENST00000614755 70 ntBASIC0.58□□□□□ -2.32
RPS28P62857 AC123767.1-202ENST00000620407 817 ntBASIC0.58□□□□□ -2.32
RPS28P62857 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms