Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MIR4303-201ENST00000581299 66 ntBASIC1.18□□□□□ -2.22
LSM6P62312 DPPA3P3-201ENST00000603842 430 ntBASIC1.18□□□□□ -2.22
LSM6P62312 AL445435.1-201ENST00000604232 665 ntBASIC1.18□□□□□ -2.22
LSM6P62312 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.18□□□□□ -2.22
LSM6P62312 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
LSM6P62312 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
LSM6P62312 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
LSM6P62312 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.17□□□□□ -2.22
LSM6P62312 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
LSM6P62312 RNU6-188P-201ENST00000364207 107 ntBASIC1.17□□□□□ -2.22
LSM6P62312 RNU6-468P-201ENST00000384003 109 ntBASIC1.17□□□□□ -2.22
LSM6P62312 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LSM6P62312 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
LSM6P62312 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.17□□□□□ -2.22
LSM6P62312 AC138623.1-201ENST00000418060 216 ntBASIC1.17□□□□□ -2.22
LSM6P62312 NCOR1P3-201ENST00000420479 303 ntBASIC1.17□□□□□ -2.22
LSM6P62312 MTND5P14-201ENST00000441481 1267 ntBASIC1.17□□□□□ -2.22
LSM6P62312 ELOCP30-201ENST00000447108 299 ntBASIC1.17□□□□□ -2.22
LSM6P62312 AC108729.1-201ENST00000487812 947 ntBASIC1.17□□□□□ -2.22
LSM6P62312 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.17□□□□□ -2.22
LSM6P62312 AC117532.1-201ENST00000514638 323 ntBASIC1.17□□□□□ -2.22
LSM6P62312 RNU6-1225P-201ENST00000516336 65 ntBASIC1.17□□□□□ -2.22
LSM6P62312 RNU6-143P-201ENST00000516942 93 ntBASIC1.17□□□□□ -2.22
LSM6P62312 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.17□□□□□ -2.22
LSM6P62312 AC023538.1-201ENST00000534576 736 ntBASIC1.17□□□□□ -2.22
LSM6P62312 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.17□□□□□ -2.22
LSM6P62312 RRN3P3-201ENST00000549207 578 ntBASIC1.17□□□□□ -2.22
LSM6P62312 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.17□□□□□ -2.22
LSM6P62312 MIR5708-201ENST00000579723 85 ntBASIC1.17□□□□□ -2.22
LSM6P62312 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.17□□□□□ -2.22
LSM6P62312 VN1R87P-201ENST00000596706 487 ntBASIC1.17□□□□□ -2.22
LSM6P62312 WISP1-OT1-201ENST00000602893 642 ntBASIC1.17□□□□□ -2.22
LSM6P62312 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.17□□□□□ -2.22
LSM6P62312 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.17□□□□□ -2.22
LSM6P62312 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.17□□□□□ -2.22
LSM6P62312 AC231657.1-201ENST00000624313 397 ntBASIC1.17□□□□□ -2.22
LSM6P62312 AC097655.1-201ENST00000635075 318 ntBASIC1.17□□□□□ -2.22
LSM6P62312 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.17□□□□□ -2.22
LSM6P62312 RNU6-1010P-201ENST00000362757 107 ntBASIC1.16□□□□□ -2.22
LSM6P62312 RNU6-236P-201ENST00000363886 106 ntBASIC1.16□□□□□ -2.22
LSM6P62312 RNU6-457P-201ENST00000363999 107 ntBASIC1.16□□□□□ -2.22
LSM6P62312 RNU6-1164P-201ENST00000364428 107 ntBASIC1.16□□□□□ -2.22
LSM6P62312 RNU6-207P-201ENST00000384137 107 ntBASIC1.16□□□□□ -2.22
LSM6P62312 U8.10-201ENST00000384260 133 ntBASIC1.16□□□□□ -2.22
LSM6P62312 MIR764-201ENST00000390811 85 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AL590084.1-201ENST00000407885 387 ntBASIC1.16□□□□□ -2.22
LSM6P62312 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.16□□□□□ -2.22
LSM6P62312 AC008267.5-201ENST00000424928 265 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.16□□□□□ -2.22
LSM6P62312 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.16□□□□□ -2.22
LSM6P62312 FDX1P2-201ENST00000450769 375 ntBASIC1.16□□□□□ -2.22
LSM6P62312 TPRKBP1-201ENST00000456243 481 ntBASIC1.16□□□□□ -2.22
LSM6P62312 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
LSM6P62312 RPL31P58-201ENST00000469001 379 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AL121594.1-201ENST00000475906 575 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.16□□□□□ -2.22
LSM6P62312 MTCYBP18-201ENST00000501056 747 ntBASIC1.16□□□□□ -2.22
LSM6P62312 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.16□□□□□ -2.22
LSM6P62312 RNA5SP445-201ENST00000515889 115 ntBASIC1.16□□□□□ -2.22
LSM6P62312 RNU2-53P-201ENST00000516257 147 ntBASIC1.16□□□□□ -2.22
LSM6P62312 RNU6-902P-201ENST00000517212 91 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AC022616.8-201ENST00000533569 253 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.16□□□□□ -2.22
LSM6P62312 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.16□□□□□ -2.22
LSM6P62312 AC093249.1-201ENST00000567049 203 ntBASIC1.16□□□□□ -2.22
LSM6P62312 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.16□□□□□ -2.22
LSM6P62312 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.16□□□□□ -2.22
LSM6P62312 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.16□□□□□ -2.22
LSM6P62312 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.16□□□□□ -2.22
LSM6P62312 AL391813.2-201ENST00000609113 322 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AL512598.1-201ENST00000610158 273 ntBASIC1.16□□□□□ -2.22
LSM6P62312 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.16□□□□□ -2.22
LSM6P62312 AC006338.1-201ENST00000618453 749 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AC005858.4-201ENST00000623191 700 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AL356094.1-201ENST00000624663 1212 ntBASIC1.16□□□□□ -2.22
LSM6P62312 AC092125.1-201ENST00000562568 1995 ntBASIC1.16□□□□□ -2.22
LSM6P62312 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
LSM6P62312 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
LSM6P62312 RNU6-529P-201ENST00000363383 104 ntBASIC1.15□□□□□ -2.23
LSM6P62312 RNA5SP100-201ENST00000410903 110 ntBASIC1.15□□□□□ -2.23
LSM6P62312 RNA5SP59-201ENST00000410922 110 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.15□□□□□ -2.23
LSM6P62312 AL121601.2-201ENST00000438019 707 ntBASIC1.15□□□□□ -2.23
LSM6P62312 MTCO3P43-201ENST00000440974 771 ntBASIC1.15□□□□□ -2.23
LSM6P62312 MTCO1P44-201ENST00000441935 243 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.15□□□□□ -2.23
LSM6P62312 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.15□□□□□ -2.23
LSM6P62312 AC108210.2-201ENST00000503681 201 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AC093801.2-201ENST00000503966 1050 ntBASIC1.15□□□□□ -2.23
LSM6P62312 SNORA31.3-201ENST00000516029 96 ntBASIC1.15□□□□□ -2.23
LSM6P62312 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
LSM6P62312 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AP003392.2-201ENST00000527269 208 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.15□□□□□ -2.23
LSM6P62312 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AC015712.3-201ENST00000559380 164 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AC009977.1-201ENST00000586015 570 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AC021171.1-201ENST00000603137 706 ntBASIC1.15□□□□□ -2.23
LSM6P62312 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.15□□□□□ -2.23
LSM6P62312 AL132822.1-201ENST00000617063 513 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms