Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RNA5SP97-201ENST00000365006 84 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 Y_RNA.307-201ENST00000365022 117 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 Y_RNA.618-201ENST00000410949 107 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC093578.1-201ENST00000415219 368 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC092047.1-201ENST00000424997 240 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 PCNPP5-201ENST00000452246 481 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 RNU6-475P-201ENST00000516073 104 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 RNU6-264P-201ENST00000517134 104 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC009812.2-201ENST00000517657 457 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC131281.1-201ENST00000522984 164 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 CASP1P1-201ENST00000526345 212 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC084851.1-201ENST00000529105 249 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC023442.1-201ENST00000531247 422 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 SYF2P1-201ENST00000550658 413 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 MIR1273C-201ENST00000578669 77 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 CPDP1-201ENST00000579660 283 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AC005899.2-201ENST00000584353 90 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 AL442067.1-201ENST00000613261 223 ntBASIC4.46□□□□□ -1.7
CHMP4BP1P59074 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHMP4BP1P59074 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 RNU4-42P-201ENST00000364738 142 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 Y_RNA.314-201ENST00000365114 102 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 RNU6-596P-201ENST00000365395 98 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 RNU6-472P-201ENST00000384299 107 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 MIR301A-201ENST00000385261 86 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 USP9YP16-201ENST00000430287 407 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 RPS15AP10-201ENST00000432472 382 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AC092573.2-201ENST00000434546 243 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 Z82210.1-201ENST00000440037 231 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 USP9YP23-201ENST00000455085 407 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AC114801.2-201ENST00000503825 781 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 HMGN1P11-201ENST00000508668 303 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 RNU6-1282P-201ENST00000516735 96 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AC025946.2-201ENST00000603398 234 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AL773545.4-201ENST00000637262 310 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 AL513478.4-201ENST00000641636 310 ntBASIC4.45□□□□□ -1.7
CHMP4BP1P59074 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHMP4BP1P59074 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 Y_RNA.210-201ENST00000364161 110 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 Y_RNA.222-201ENST00000364264 102 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 MIR325-201ENST00000385260 98 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 RPL21P1-201ENST00000399532 476 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AL138885.1-201ENST00000405921 675 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 RNU6-101P-201ENST00000410323 104 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AC099799.1-201ENST00000439809 192 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 HIGD1AP2-201ENST00000446367 280 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 RPL17P19-201ENST00000489069 552 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 RPL22P13-201ENST00000493291 347 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 MIR892C-201ENST00000516410 77 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 Y_RNA.680-201ENST00000516441 93 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 HSBP1P1-201ENST00000555205 166 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 ZNF192P1-203ENST00000565888 810 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AC136601.2-201ENST00000604356 474 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AL021879.1-201ENST00000611756 288 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 U2.1-201ENST00000618978 145 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AC012314.7-201ENST00000619693 93 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AL034408.1-202ENST00000636088 415 ntBASIC4.44□□□□□ -1.7
CHMP4BP1P59074 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CHMP4BP1P59074 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHMP4BP1P59074 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.43□□□□□ -1.7
CHMP4BP1P59074 Y_RNA.39-201ENST00000362620 98 ntBASIC4.43□□□□□ -1.7
CHMP4BP1P59074 RNU6-790P-201ENST00000384479 105 ntBASIC4.43□□□□□ -1.7
CHMP4BP1P59074 Y_RNA.533-201ENST00000384596 114 ntBASIC4.43□□□□□ -1.7
CHMP4BP1P59074 MIR7-3-201ENST00000384898 110 ntBASIC4.43□□□□□ -1.7
CHMP4BP1P59074 RNU6-1156P-201ENST00000410365 100 ntBASIC4.43□□□□□ -1.7
CHMP4BP1P59074 RNA5SP44-201ENST00000410446 133 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms