Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC024153.1-201ENST00000603103 365 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 AC096772.1-201ENST00000609146 564 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
RHBDL3P58872 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.47□□□□□ -1.85
RHBDL3P58872 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.47□□□□□ -1.85
RHBDL3P58872 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
RHBDL3P58872 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RHBDL3P58872 HAUS6P2-201ENST00000433254 2404 ntBASIC3.46□□□□□ -1.85
RHBDL3P58872 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
RHBDL3P58872 AL365361.1-201ENST00000566942 3481 ntBASIC3.46□□□□□ -1.85
RHBDL3P58872 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
RHBDL3P58872 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RHBDL3P58872 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.46□□□□□ -1.86
RHBDL3P58872 RNU6-858P-201ENST00000362436 107 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 U3.6-201ENST00000363622 211 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 RNU6-1322P-201ENST00000364309 107 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 SNORA9.2-201ENST00000365361 133 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 Y_RNA.480-201ENST00000384364 102 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 BX682237.1-201ENST00000415016 335 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AC000111.3-201ENST00000433478 193 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.46□□□□□ -1.86
RHBDL3P58872 DNAJC19P4-201ENST00000440115 345 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 PSPHP1-201ENST00000450062 261 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.46□□□□□ -1.86
RHBDL3P58872 AL163973.1-201ENST00000484753 577 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 MRPL42P6-201ENST00000486397 371 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AC092436.1-201ENST00000506450 503 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 RPL7P20-201ENST00000520308 745 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.46□□□□□ -1.86
RHBDL3P58872 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.46□□□□□ -1.86
RHBDL3P58872 MIR3162-201ENST00000581818 82 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 MIR3117-201ENST00000584034 78 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AP001330.5-201ENST00000607176 411 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AC064807.4-201ENST00000607201 407 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 Z82243.1-201ENST00000609432 473 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AC015540.1-201ENST00000615828 501 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AC026585.1-201ENST00000619582 524 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.46□□□□□ -1.86
RHBDL3P58872 AC139792.3-201ENST00000623525 224 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 CR381653.2-201ENST00000624041 768 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 AC138627.2-201ENST00000624202 601 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 MIR6863-201ENST00000636112 90 ntBASIC3.46□□□□□ -1.86
RHBDL3P58872 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RHBDL3P58872 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.45□□□□□ -1.86
RHBDL3P58872 AL118520.1-201ENST00000450770 291 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDL3P58872 AP001324.2-201ENST00000461163 319 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 SRRM1P2-201ENST00000464531 1192 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDL3P58872 SNORA31.6-201ENST00000516241 130 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 SCARNA3-201ENST00000517097 143 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AC109329.2-201ENST00000519658 482 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.45□□□□□ -1.86
RHBDL3P58872 AP001893.2-201ENST00000526949 202 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AL137161.1-201ENST00000532231 390 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 MIR4319-201ENST00000577285 85 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AC008752.3-201ENST00000588113 712 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.45□□□□□ -1.86
RHBDL3P58872 AC008121.1-201ENST00000603244 268 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AL356280.1-201ENST00000603614 379 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AL627309.6-201ENST00000606857 840 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
RHBDL3P58872 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 AC022418.1-201ENST00000624118 445 ntBASIC3.45□□□□□ -1.86
RHBDL3P58872 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDL3P58872 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDL3P58872 MTND4P27-201ENST00000450813 1354 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AC062016.1-201ENST00000355719 319 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 RNU6-552P-201ENST00000362869 119 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 RNU6-1085P-201ENST00000363576 107 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 Y_RNA.255-201ENST00000364581 97 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 RNU6-384P-201ENST00000364900 104 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 RN7SKP123-201ENST00000410732 291 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AL139281.1-201ENST00000422120 335 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.44□□□□□ -1.86
RHBDL3P58872 AL445687.1-201ENST00000439946 251 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDL3P58872 RNU6-261P-201ENST00000459506 102 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 MED28P2-201ENST00000475771 317 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDL3P58872 MTND3P25-201ENST00000509243 135 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AC107016.2-201ENST00000547968 190 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 CR383656.8-201ENST00000549046 145 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.44□□□□□ -1.86
RHBDL3P58872 AC138761.3-201ENST00000579993 334 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 MTATP6P3-201ENST00000581686 676 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AC073539.2-201ENST00000597113 165 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AC087241.4-201ENST00000612441 480 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AC011890.2-201ENST00000613393 294 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AL354950.2-201ENST00000617939 290 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AL031601.2-202ENST00000622650 282 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 AC124864.2-201ENST00000624736 186 ntBASIC3.44□□□□□ -1.86
RHBDL3P58872 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.44□□□□□ -1.86
RHBDL3P58872 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RHBDL3P58872 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
RHBDL3P58872 RNA5SP383-201ENST00000362934 120 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 RNU6-487P-201ENST00000365430 104 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 Y_RNA.517-201ENST00000384551 106 ntBASIC3.43□□□□□ -1.86
RHBDL3P58872 RNU6-903P-201ENST00000391270 109 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms