Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 RNU1-23P-201ENST00000363361 144 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 RNA5SP138-201ENST00000365098 114 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN18P56856 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
CLDN18P56856 RNU1-57P-201ENST00000384491 166 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 MIR518A2-201ENST00000384966 87 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 MIR518D-201ENST00000385014 87 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 SNORA40C-201ENST00000391285 128 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 RNA5SP450-201ENST00000411206 102 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AC006366.1-201ENST00000422002 759 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AC092648.1-201ENST00000425870 423 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN18P56856 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 MTATP6P14-201ENST00000455189 673 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 USP9YP25-201ENST00000457708 443 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 MTAPP1-201ENST00000489154 819 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 HMGB3P17-201ENST00000504195 649 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.74□□□□□ -2.13
CLDN18P56856 AC112206.4-201ENST00000515142 405 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 ARL2BPP2-201ENST00000550907 489 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AL157871.3-201ENST00000557231 293 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN18P56856 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.74□□□□□ -2.13
CLDN18P56856 AP001981.2-201ENST00000603241 418 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AC021755.4-201ENST00000616620 456 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 MIR7843-201ENST00000622274 79 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AC092656.1-203ENST00000624134 423 ntBASIC1.74□□□□□ -2.13
CLDN18P56856 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.74□□□□□ -2.13
CLDN18P56856 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN18P56856 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLDN18P56856 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN18P56856 MTND4P16-201ENST00000466108 1367 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 RNY4P24-201ENST00000362735 96 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 RNU6-433P-201ENST00000363216 104 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 SMIM11P1-201ENST00000369586 178 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN18P56856 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CLDN18P56856 RNU2-36P-201ENST00000410361 191 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 RNU6-1140P-201ENST00000410517 106 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 AL591704.1-201ENST00000432574 275 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 RNU1-40P-201ENST00000516816 164 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 RNU1-97P-201ENST00000516872 164 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 FAM92A1P1-201ENST00000528023 890 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 DUXAP5-201ENST00000529668 529 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 DUXAP1-201ENST00000556632 463 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 AC110588.1-201ENST00000559699 137 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 MIR1273C-201ENST00000578669 77 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDN18P56856 SNRPGP17-201ENST00000603780 214 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 AP000860.1-201ENST00000605250 559 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 AL773524.1-201ENST00000614065 229 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.73□□□□□ -2.13
CLDN18P56856 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLDN18P56856 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLDN18P56856 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.73□□□□□ -2.13
CLDN18P56856 AC103710.2-202ENST00000641454 2853 ntBASIC1.73□□□□□ -2.13
CLDN18P56856 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
CLDN18P56856 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CLDN18P56856 RNU6-190P-201ENST00000384154 102 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 RNU6-166P-201ENST00000384371 107 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 RNA5SP489-201ENST00000410986 109 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN18P56856 AL158823.1-201ENST00000418441 478 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN18P56856 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN18P56856 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN18P56856 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN18P56856 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN18P56856 USP9YP24-201ENST00000434374 697 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 USP9YP17-201ENST00000444617 696 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN18P56856 AC003071.1-201ENST00000451219 789 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 MED28P2-201ENST00000475771 317 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AC134050.1-201ENST00000495088 933 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN18P56856 AC116337.1-201ENST00000509680 687 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.72□□□□□ -2.13
CLDN18P56856 RNA5SP182-201ENST00000516064 82 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 RNU2-53P-201ENST00000516257 147 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 RNU6-667P-201ENST00000517186 102 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AC025678.1-201ENST00000567861 338 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.72□□□□□ -2.13
CLDN18P56856 AL109918.3-201ENST00000603072 338 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AL670379.2-201ENST00000604983 252 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AL670379.4-201ENST00000605279 254 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN18P56856 AC006338.1-201ENST00000618453 749 ntBASIC1.72□□□□□ -2.13
CLDN18P56856 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN18P56856 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.72□□□□□ -2.13
CLDN18P56856 RBBP8P1-201ENST00000449447 1844 ntBASIC1.71□□□□□ -2.14
CLDN18P56856 RNU6-395P-201ENST00000365662 106 ntBASIC1.71□□□□□ -2.14
CLDN18P56856 Y_RNA.534-201ENST00000384599 112 ntBASIC1.71□□□□□ -2.14
CLDN18P56856 MIR583-201ENST00000384846 75 ntBASIC1.71□□□□□ -2.14
CLDN18P56856 RNU6-1242P-201ENST00000391052 103 ntBASIC1.71□□□□□ -2.14
CLDN18P56856 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.71□□□□□ -2.14
CLDN18P56856 AC016831.2-201ENST00000417179 352 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms