Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CMC4P56277 AC012640.5-201ENST00000623897 319 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC092656.1-203ENST00000624134 423 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AC110994.2-201ENST00000635481 492 ntBASIC1.57□□□□□ -2.16
CMC4P56277 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.57□□□□□ -2.16
CMC4P56277 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CMC4P56277 RNU6-1010P-201ENST00000362757 107 ntBASIC1.56□□□□□ -2.16
CMC4P56277 RNU5E-5P-201ENST00000365379 116 ntBASIC1.56□□□□□ -2.16
CMC4P56277 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.56□□□□□ -2.16
CMC4P56277 MIR558-201ENST00000384920 94 ntBASIC1.56□□□□□ -2.16
CMC4P56277 MRPL42P2-201ENST00000403169 426 ntBASIC1.56□□□□□ -2.16
CMC4P56277 FTH1P15-201ENST00000406984 280 ntBASIC1.56□□□□□ -2.16
CMC4P56277 SNORD23.1-201ENST00000408212 104 ntBASIC1.56□□□□□ -2.16
CMC4P56277 Y_RNA.623-201ENST00000411128 95 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AL365338.1-201ENST00000422282 858 ntBASIC1.56□□□□□ -2.16
CMC4P56277 EIF4EP4-201ENST00000424916 578 ntBASIC1.56□□□□□ -2.16
CMC4P56277 MED13P1-201ENST00000428342 171 ntBASIC1.56□□□□□ -2.16
CMC4P56277 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.56□□□□□ -2.16
CMC4P56277 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CMC4P56277 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CMC4P56277 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.56□□□□□ -2.16
CMC4P56277 AC025033.1-201ENST00000463883 194 ntBASIC1.56□□□□□ -2.16
CMC4P56277 RPL9P6-201ENST00000492764 598 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC117522.2-201ENST00000510049 657 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.56□□□□□ -2.16
CMC4P56277 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.56□□□□□ -2.16
CMC4P56277 AP003181.2-201ENST00000528941 181 ntBASIC1.56□□□□□ -2.16
CMC4P56277 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CMC4P56277 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CMC4P56277 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.56□□□□□ -2.16
CMC4P56277 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.56□□□□□ -2.16
CMC4P56277 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC078814.3-201ENST00000553036 491 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC091544.4-201ENST00000555268 342 ntBASIC1.56□□□□□ -2.16
CMC4P56277 PSMA3P-201ENST00000555485 635 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.56□□□□□ -2.16
CMC4P56277 MYL12BP1-201ENST00000569826 507 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC007336.1-201ENST00000576365 3828 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC090616.2-202ENST00000584248 222 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC112191.3-201ENST00000604371 277 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AL139286.2-201ENST00000606838 396 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC104237.2-201ENST00000612456 443 ntBASIC1.56□□□□□ -2.16
CMC4P56277 MIR6895-201ENST00000613497 78 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AL161423.1-201ENST00000613700 262 ntBASIC1.56□□□□□ -2.16
CMC4P56277 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.56□□□□□ -2.16
CMC4P56277 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.56□□□□□ -2.16
CMC4P56277 AC024940.5-201ENST00000622889 474 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC099654.13-201ENST00000639774 207 ntBASIC1.56□□□□□ -2.16
CMC4P56277 MTND5P6-201ENST00000422338 1798 ntBASIC1.56□□□□□ -2.16
CMC4P56277 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.56□□□□□ -2.16
CMC4P56277 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.56□□□□□ -2.16
CMC4P56277 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.56□□□□□ -2.16
CMC4P56277 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.55□□□□□ -2.16
CMC4P56277 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CMC4P56277 RNU6-942P-201ENST00000363002 107 ntBASIC1.55□□□□□ -2.16
CMC4P56277 RNU6-843P-201ENST00000384454 104 ntBASIC1.55□□□□□ -2.16
CMC4P56277 RN7SKP158-201ENST00000410453 326 ntBASIC1.55□□□□□ -2.16
CMC4P56277 RNU2-8P-201ENST00000410727 190 ntBASIC1.55□□□□□ -2.16
CMC4P56277 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.55□□□□□ -2.16
CMC4P56277 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.55□□□□□ -2.16
CMC4P56277 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.55□□□□□ -2.16
CMC4P56277 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.55□□□□□ -2.16
CMC4P56277 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.55□□□□□ -2.16
CMC4P56277 AC119618.1-201ENST00000434191 222 ntBASIC1.55□□□□□ -2.16
CMC4P56277 RPS24P1-201ENST00000438550 371 ntBASIC1.55□□□□□ -2.16
CMC4P56277 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.55□□□□□ -2.16
CMC4P56277 AL118520.1-201ENST00000450770 291 ntBASIC1.55□□□□□ -2.16
CMC4P56277 SNRPFP4-201ENST00000456366 242 ntBASIC1.55□□□□□ -2.16
CMC4P56277 MTAPP1-201ENST00000489154 819 ntBASIC1.55□□□□□ -2.16
CMC4P56277 AC022493.1-201ENST00000492984 337 ntBASIC1.55□□□□□ -2.16
CMC4P56277 AC090255.1-201ENST00000495779 349 ntBASIC1.55□□□□□ -2.16
CMC4P56277 ANXA2P1-201ENST00000505539 926 ntBASIC1.55□□□□□ -2.16
CMC4P56277 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.55□□□□□ -2.16
CMC4P56277 SNORA48.11-201ENST00000517015 89 ntBASIC1.55□□□□□ -2.16
CMC4P56277 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.55□□□□□ -2.16
CMC4P56277 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.55□□□□□ -2.16
CMC4P56277 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CMC4P56277 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.55□□□□□ -2.16
CMC4P56277 MTND1P24-201ENST00000552175 861 ntBASIC1.55□□□□□ -2.16
CMC4P56277 AC092325.1-201ENST00000566449 554 ntBASIC1.55□□□□□ -2.16
CMC4P56277 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.55□□□□□ -2.16
CMC4P56277 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CMC4P56277 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.55□□□□□ -2.16
CMC4P56277 AC009314.1-201ENST00000603871 304 ntBASIC1.55□□□□□ -2.16
CMC4P56277 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.55□□□□□ -2.16
CMC4P56277 MIR3529-201ENST00000637713 78 ntBASIC1.55□□□□□ -2.16
CMC4P56277 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.55□□□□□ -2.16
CMC4P56277 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.55□□□□□ -2.16
CMC4P56277 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.54□□□□□ -2.16
CMC4P56277 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.54□□□□□ -2.16
CMC4P56277 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CMC4P56277 RNU5E-1-201ENST00000362477 120 ntBASIC1.54□□□□□ -2.16
CMC4P56277 MIR144-201ENST00000384886 86 ntBASIC1.54□□□□□ -2.16
CMC4P56277 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CMC4P56277 RPL23AP32-201ENST00000395315 459 ntBASIC1.54□□□□□ -2.16
CMC4P56277 MTCYBP36-201ENST00000404146 440 ntBASIC1.54□□□□□ -2.16
CMC4P56277 AL031779.1-201ENST00000415663 330 ntBASIC1.54□□□□□ -2.16
CMC4P56277 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.54□□□□□ -2.16
CMC4P56277 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.54□□□□□ -2.16
CMC4P56277 AC009518.2-201ENST00000418056 731 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms