Protein–RNA interactions for Protein: P53609

PGGT1B, Geranylgeranyl transferase type-1 subunit beta, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1BP53609 RNA5SP383-201ENST00000362934 120 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 Y_RNA.135-201ENST00000363439 95 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 SNORA33.2-201ENST00000365413 134 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 Y_RNA.399-201ENST00000383955 105 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 RNU6-306P-201ENST00000384617 107 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 RNU6-310P-201ENST00000384655 107 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 MIR449B-201ENST00000384995 97 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 SNORD67-201ENST00000390833 111 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 Y_RNA.646-201ENST00000410980 101 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.11□□□□□ -1.91
PGGT1BP53609 RPL21P90-201ENST00000415692 466 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
PGGT1BP53609 PMCHL1-202ENST00000423102 261 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 RPS12P18-201ENST00000442381 270 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 PRDX3P3-201ENST00000447765 522 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.11□□□□□ -1.91
PGGT1BP53609 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.11□□□□□ -1.91
PGGT1BP53609 Y_RNA.653-201ENST00000459091 95 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 RN7SL75P-201ENST00000461926 281 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 RPL7P5-201ENST00000471472 736 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
PGGT1BP53609 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.11□□□□□ -1.91
PGGT1BP53609 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PGGT1BP53609 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PGGT1BP53609 AL359273.1-201ENST00000510918 627 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
PGGT1BP53609 SNORA31.3-201ENST00000516029 96 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 RNA5SP471-201ENST00000516971 106 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.11□□□□□ -1.91
PGGT1BP53609 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.11□□□□□ -1.91
PGGT1BP53609 AC025423.5-201ENST00000550230 219 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 SYF2P1-201ENST00000550658 413 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 MIR5047-201ENST00000579212 100 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.11□□□□□ -1.91
PGGT1BP53609 MIR3941-201ENST00000582572 103 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.11□□□□□ -1.91
PGGT1BP53609 AC073539.2-201ENST00000597113 165 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 BDH2P1-201ENST00000602288 736 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 uc_338.22-201ENST00000622722 187 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 AC022418.1-201ENST00000624118 445 ntBASIC3.11□□□□□ -1.91
PGGT1BP53609 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PGGT1BP53609 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PGGT1BP53609 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.11□□□□□ -1.91
PGGT1BP53609 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
PGGT1BP53609 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.1□□□□□ -1.91
PGGT1BP53609 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PGGT1BP53609 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PGGT1BP53609 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PGGT1BP53609 RNU5A-1-201ENST00000362698 116 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 Y_RNA.187-201ENST00000363918 113 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 Y_RNA.197-201ENST00000364004 102 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 Y_RNA.202-201ENST00000364083 110 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 RNU6-512P-201ENST00000364438 103 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 RNU6-45P-201ENST00000384471 107 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 MIR578-201ENST00000384828 96 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.1□□□□□ -1.91
PGGT1BP53609 AC113618.1-201ENST00000416747 285 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.1□□□□□ -1.91
PGGT1BP53609 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.1□□□□□ -1.91
PGGT1BP53609 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.1□□□□□ -1.91
PGGT1BP53609 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.1□□□□□ -1.91
PGGT1BP53609 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.1□□□□□ -1.91
PGGT1BP53609 RPL21P41-201ENST00000459863 264 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 RPL23AP62-201ENST00000463396 453 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AC130509.1-201ENST00000464158 433 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 RPS23P3-201ENST00000470993 430 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
PGGT1BP53609 HSPE1P6-201ENST00000479457 291 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.1□□□□□ -1.91
PGGT1BP53609 SUMO2P6-201ENST00000505273 288 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.1□□□□□ -1.91
PGGT1BP53609 MTCYBP40-201ENST00000509390 1135 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 RNU6-1046P-201ENST00000516538 107 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 RNU6-914P-201ENST00000516749 109 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.1□□□□□ -1.91
PGGT1BP53609 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.1□□□□□ -1.91
PGGT1BP53609 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.1□□□□□ -1.91
PGGT1BP53609 AL355836.1-201ENST00000555951 870 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.1□□□□□ -1.91
PGGT1BP53609 MIR4444-1-201ENST00000581696 74 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 UBL5P2-201ENST00000583788 219 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 MIR4444-2-201ENST00000584390 74 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AC006504.6-201ENST00000590142 199 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.1□□□□□ -1.91
PGGT1BP53609 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PGGT1BP53609 AL591516.1-201ENST00000611326 274 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 AL669831.3-213ENST00000636676 183 ntBASIC3.1□□□□□ -1.91
PGGT1BP53609 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PGGT1BP53609 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PGGT1BP53609 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.09□□□□□ -1.91
PGGT1BP53609 KPNA2P1-201ENST00000458289 1591 ntBASIC3.09□□□□□ -1.91
PGGT1BP53609 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.09□□□□□ -1.91
PGGT1BP53609 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PGGT1BP53609 RNU6-371P-201ENST00000364283 108 ntBASIC3.09□□□□□ -1.91
PGGT1BP53609 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PGGT1BP53609 Y_RNA.404-201ENST00000383978 102 ntBASIC3.09□□□□□ -1.91
PGGT1BP53609 Y_RNA.482-201ENST00000384377 111 ntBASIC3.09□□□□□ -1.91
PGGT1BP53609 RNU6-1160P-201ENST00000384546 104 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms