Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.51□□□□□ -1.85
HMGA2P52926 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 Y_RNA.275-201ENST00000364726 110 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 RNU6-1226P-201ENST00000384317 107 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 RNU6-14P-201ENST00000384630 106 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HMGA2P52926 U3.22-201ENST00000391120 215 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 AL591034.2-201ENST00000402839 359 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 Z98941.1-201ENST00000407764 100 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 AL512844.2-201ENST00000433990 593 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 RN7SL432P-201ENST00000484057 298 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGA2P52926 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGA2P52926 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGA2P52926 AP006245.1-201ENST00000522549 120 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGA2P52926 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGA2P52926 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.51□□□□□ -1.85
HMGA2P52926 MIR4738-201ENST00000579134 87 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGA2P52926 AC024940.4-201ENST00000605507 246 ntBASIC3.51□□□□□ -1.85
HMGA2P52926 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGA2P52926 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA2P52926 AC008568.2-201ENST00000623862 2313 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA2P52926 AL356489.2-201ENST00000566968 3528 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 RNU6-1284P-201ENST00000363701 100 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 SNORA58B-201ENST00000364259 136 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 RNA5SP267-201ENST00000364893 126 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 Y_RNA.358-201ENST00000365491 99 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 SNORD116-14-201ENST00000383894 92 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 SNORD116-17-201ENST00000383929 92 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 SNORD116-15-201ENST00000384445 92 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 SNORD116-20-201ENST00000384529 92 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 SNORD116-19-201ENST00000384729 92 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 RNU2-61P-201ENST00000411069 191 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 CYCSP33-201ENST00000414485 327 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 EI24P1-201ENST00000416584 867 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 MTND4LP9-201ENST00000427694 174 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 TOMM20P4-201ENST00000427861 435 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 AC073063.1-201ENST00000434352 607 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 AP000936.3-201ENST00000438127 255 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 SNORA71B-202ENST00000439232 272 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 AC105137.1-201ENST00000484355 562 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 CYCTP-201ENST00000504253 315 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 MTND3P25-201ENST00000509243 135 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 Y_RNA.686-201ENST00000516548 134 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 RNU6-1012P-201ENST00000516606 109 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 RN7SKP96-201ENST00000516948 297 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGA2P52926 DEFB108D-201ENST00000527787 222 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGA2P52926 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGA2P52926 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGA2P52926 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGA2P52926 MIR4679-2-201ENST00000578358 77 ntBASIC3.5□□□□□ -1.85
HMGA2P52926 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGA2P52926 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGA2P52926 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGA2P52926 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGA2P52926 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGA2P52926 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGA2P52926 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGA2P52926 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGA2P52926 RNU6-283P-201ENST00000364788 107 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 RNU6-449P-201ENST00000383914 107 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 RNU6-1293P-201ENST00000384077 107 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 RNY3P4-201ENST00000384428 101 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 AL513475.1-201ENST00000406602 315 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGA2P52926 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGA2P52926 PTGES3P4-201ENST00000426243 356 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 AL591704.1-201ENST00000432574 275 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 IFNA11P-201ENST00000446352 526 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGA2P52926 SNORD2.1-201ENST00000458762 69 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 RPS27AP1-201ENST00000475545 471 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 RAC1P2-201ENST00000511164 579 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGA2P52926 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGA2P52926 AP004242.1-201ENST00000533701 349 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 MIR3138-201ENST00000585238 82 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 IPO5P1-202ENST00000600039 287 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 AC123912.5-201ENST00000605470 343 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 RNU6-156P-201ENST00000621869 107 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGA2P52926 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.49□□□□□ -1.85
HMGA2P52926 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGA2P52926 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGA2P52926 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms