Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC012507.3-201ENST00000603556 477 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AC015540.1-201ENST00000615828 501 ntBASIC2.7□□□□□ -1.98
LHX1P48742 U6.42-201ENST00000618440 107 ntBASIC2.7□□□□□ -1.98
LHX1P48742 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.7□□□□□ -1.98
LHX1P48742 AC243829.7-201ENST00000633081 225 ntBASIC2.7□□□□□ -1.98
LHX1P48742 MIR6863-201ENST00000636112 90 ntBASIC2.7□□□□□ -1.98
LHX1P48742 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.7□□□□□ -1.98
LHX1P48742 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.7□□□□□ -1.98
LHX1P48742 ZNF519P1-201ENST00000449011 1626 ntBASIC2.7□□□□□ -1.98
LHX1P48742 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LHX1P48742 HSPA8P4-201ENST00000511877 1920 ntBASIC2.7□□□□□ -1.98
LHX1P48742 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LHX1P48742 AC010889.1-201ENST00000566193 2666 ntBASIC2.69□□□□□ -1.98
LHX1P48742 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LHX1P48742 MIR412-201ENST00000362142 91 ntBASIC2.69□□□□□ -1.98
LHX1P48742 Z98749.2-208ENST00000381646 500 ntBASIC2.69□□□□□ -1.98
LHX1P48742 MIR578-201ENST00000384828 96 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AC068050.1-201ENST00000394891 380 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RPL21P75-201ENST00000396599 483 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RPL21P28-201ENST00000401418 483 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AL592114.1-201ENST00000403842 483 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RNU4-46P-201ENST00000410818 138 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.69□□□□□ -1.98
LHX1P48742 MTCO3P30-201ENST00000426425 670 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.69□□□□□ -1.98
LHX1P48742 AC009296.1-201ENST00000443146 155 ntBASIC2.69□□□□□ -1.98
LHX1P48742 CACYBPP2-201ENST00000453625 678 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AC233279.1-201ENST00000455300 423 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AL583843.1-201ENST00000456070 346 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AL356010.1-201ENST00000456364 102 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RNU7-63P-201ENST00000459054 62 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RPL21P39-201ENST00000463605 483 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RPL31P41-201ENST00000477967 372 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RPL21P93-201ENST00000480465 489 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AC087190.1-201ENST00000484462 480 ntBASIC2.69□□□□□ -1.98
LHX1P48742 SRIP1-201ENST00000489235 288 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AC093591.1-201ENST00000491435 481 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RPL21P16-201ENST00000495531 483 ntBASIC2.69□□□□□ -1.98
LHX1P48742 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.69□□□□□ -1.98
LHX1P48742 RPL37P25-201ENST00000507308 276 ntBASIC2.69□□□□□ -1.98
LHX1P48742 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.69□□□□□ -1.98
LHX1P48742 AC113155.1-201ENST00000511141 769 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.69□□□□□ -1.98
LHX1P48742 AC105417.1-201ENST00000514691 285 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RNA5SP320-201ENST00000516263 124 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RNU6-56P-201ENST00000516986 93 ntBASIC2.69□□□□□ -1.98
LHX1P48742 RPL7P20-201ENST00000520308 745 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AL121821.2-201ENST00000556081 394 ntBASIC2.69□□□□□ -1.98
LHX1P48742 LINC00933-203ENST00000559812 219 ntBASIC2.69□□□□□ -1.98
LHX1P48742 MIR5692A1-201ENST00000580523 69 ntBASIC2.69□□□□□ -1.98
LHX1P48742 AC010620.2-201ENST00000600135 313 ntBASIC2.69□□□□□ -1.98
LHX1P48742 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.69□□□□□ -1.98
LHX1P48742 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.69□□□□□ -1.98
LHX1P48742 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LHX1P48742 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
LHX1P48742 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
LHX1P48742 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LHX1P48742 OR4G2P-201ENST00000328113 903 ntBASIC2.68□□□□□ -1.98
LHX1P48742 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LHX1P48742 RNU6-1179P-201ENST00000384667 107 ntBASIC2.68□□□□□ -1.98
LHX1P48742 SNORD116-4-201ENST00000384733 96 ntBASIC2.68□□□□□ -1.98
LHX1P48742 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
LHX1P48742 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LHX1P48742 AL591416.1-201ENST00000404015 867 ntBASIC2.68□□□□□ -1.98
LHX1P48742 RPL21P90-201ENST00000415692 466 ntBASIC2.68□□□□□ -1.98
LHX1P48742 AL353193.1-201ENST00000421444 268 ntBASIC2.68□□□□□ -1.98
LHX1P48742 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.68□□□□□ -1.98
LHX1P48742 DNAJC19P4-201ENST00000440115 345 ntBASIC2.68□□□□□ -1.98
LHX1P48742 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.68□□□□□ -1.98
LHX1P48742 RPL9P6-201ENST00000492764 598 ntBASIC2.68□□□□□ -1.98
LHX1P48742 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.68□□□□□ -1.98
LHX1P48742 AC092436.1-201ENST00000506450 503 ntBASIC2.68□□□□□ -1.98
LHX1P48742 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.68□□□□□ -1.98
LHX1P48742 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.68□□□□□ -1.98
LHX1P48742 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.68□□□□□ -1.98
LHX1P48742 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.68□□□□□ -1.98
LHX1P48742 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.68□□□□□ -1.98
LHX1P48742 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.68□□□□□ -1.98
LHX1P48742 AC008752.3-201ENST00000588113 712 ntBASIC2.68□□□□□ -1.98
LHX1P48742 AC007621.1-201ENST00000604544 437 ntBASIC2.68□□□□□ -1.98
LHX1P48742 CTSLP2-204ENST00000629029 392 ntBASIC2.68□□□□□ -1.98
LHX1P48742 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.68□□□□□ -1.98
LHX1P48742 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.68□□□□□ -1.98
LHX1P48742 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LHX1P48742 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
LHX1P48742 RNU4-82P-201ENST00000362443 140 ntBASIC2.67□□□□□ -1.98
LHX1P48742 SNORD3E-201ENST00000362899 217 ntBASIC2.67□□□□□ -1.98
LHX1P48742 RNA5SP456-201ENST00000364002 114 ntBASIC2.67□□□□□ -1.98
LHX1P48742 RNU6-371P-201ENST00000364283 108 ntBASIC2.67□□□□□ -1.98
LHX1P48742 RNU6-898P-201ENST00000365627 104 ntBASIC2.67□□□□□ -1.98
LHX1P48742 Y_RNA.623-201ENST00000411128 95 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX1P48742 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.67□□□□□ -1.98
LHX1P48742 SAR1AP4-201ENST00000429225 591 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.67□□□□□ -1.98
LHX1P48742 AC000111.3-201ENST00000433478 193 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AL161651.1-201ENST00000440882 223 ntBASIC2.67□□□□□ -1.98
LHX1P48742 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms