Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 Y_RNA.608-201ENST00000410647 95 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.94□□□□□ -2.1
RFX3P48380 HMGN2P38-201ENST00000423806 265 ntBASIC1.94□□□□□ -2.1
RFX3P48380 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX3P48380 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX3P48380 AL593851.1-201ENST00000426171 157 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX3P48380 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.94□□□□□ -2.1
RFX3P48380 AL139415.2-201ENST00000431968 163 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.94□□□□□ -2.1
RFX3P48380 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.94□□□□□ -2.1
RFX3P48380 AL590365.1-201ENST00000450788 243 ntBASIC1.94□□□□□ -2.1
RFX3P48380 snoU13.26-201ENST00000459452 105 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC025033.1-201ENST00000463883 194 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC140059.1-201ENST00000489238 361 ntBASIC1.94□□□□□ -2.1
RFX3P48380 RPL9P6-201ENST00000492764 598 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC023194.1-201ENST00000493084 308 ntBASIC1.94□□□□□ -2.1
RFX3P48380 FAM92A1P2-202ENST00000504766 877 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX3P48380 RNU7-51P-201ENST00000516560 62 ntBASIC1.94□□□□□ -2.1
RFX3P48380 RNU6-1315P-201ENST00000517187 99 ntBASIC1.94□□□□□ -2.1
RFX3P48380 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RFX3P48380 AC079598.5-201ENST00000547460 117 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX3P48380 AC009094.1-201ENST00000564443 426 ntBASIC1.94□□□□□ -2.1
RFX3P48380 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RFX3P48380 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.94□□□□□ -2.1
RFX3P48380 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AL355297.2-201ENST00000604792 129 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AL031775.1-201ENST00000607014 887 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC022893.3-201ENST00000607665 437 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AP001486.3-201ENST00000615334 372 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC104010.1-201ENST00000616889 150 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC092140.2-201ENST00000618027 521 ntBASIC1.94□□□□□ -2.1
RFX3P48380 AC092192.1-201ENST00000633154 1018 ntBASIC1.94□□□□□ -2.1
RFX3P48380 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.93□□□□□ -2.1
RFX3P48380 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
RFX3P48380 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.93□□□□□ -2.1
RFX3P48380 RNU6-946P-201ENST00000383878 107 ntBASIC1.93□□□□□ -2.1
RFX3P48380 MIR504-201ENST00000385065 83 ntBASIC1.93□□□□□ -2.1
RFX3P48380 MRPL42P2-201ENST00000403169 426 ntBASIC1.93□□□□□ -2.1
RFX3P48380 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
RFX3P48380 RN7SKP223-201ENST00000410582 62 ntBASIC1.93□□□□□ -2.1
RFX3P48380 RNU2-63P-201ENST00000410792 194 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AL356379.1-201ENST00000414105 126 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX3P48380 RPS15AP12-201ENST00000419498 388 ntBASIC1.93□□□□□ -2.1
RFX3P48380 Z99497.1-201ENST00000421282 135 ntBASIC1.93□□□□□ -2.1
RFX3P48380 MTND2P9-201ENST00000422293 931 ntBASIC1.93□□□□□ -2.1
RFX3P48380 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX3P48380 TOMM20P4-201ENST00000427861 435 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX3P48380 AC096638.1-201ENST00000444678 216 ntBASIC1.93□□□□□ -2.1
RFX3P48380 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX3P48380 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX3P48380 AL118520.1-201ENST00000450770 291 ntBASIC1.93□□□□□ -2.1
RFX3P48380 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.93□□□□□ -2.1
RFX3P48380 AC093899.1-201ENST00000457984 376 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AL139824.2-201ENST00000458731 1095 ntBASIC1.93□□□□□ -2.1
RFX3P48380 RPS3AP22-201ENST00000488297 769 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.93□□□□□ -2.1
RFX3P48380 AC018437.1-201ENST00000492214 406 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AC109927.2-201ENST00000506416 303 ntBASIC1.93□□□□□ -2.1
RFX3P48380 MTND1P22-201ENST00000510572 951 ntBASIC1.93□□□□□ -2.1
RFX3P48380 RNU6-1129P-201ENST00000515964 104 ntBASIC1.93□□□□□ -2.1
RFX3P48380 RNU6-914P-201ENST00000516749 109 ntBASIC1.93□□□□□ -2.1
RFX3P48380 SNORA31.19-201ENST00000517079 126 ntBASIC1.93□□□□□ -2.1
RFX3P48380 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
RFX3P48380 HSPE1P18-201ENST00000517602 280 ntBASIC1.93□□□□□ -2.1
RFX3P48380 EEF1A1P37-201ENST00000522748 715 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AP000873.5-201ENST00000533906 236 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AC233702.2-202ENST00000562547 291 ntBASIC1.93□□□□□ -2.1
RFX3P48380 MIR1273C-201ENST00000578669 77 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.93□□□□□ -2.1
RFX3P48380 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.93□□□□□ -2.1
RFX3P48380 AC025165.5-201ENST00000602802 578 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AC138749.5-201ENST00000611461 208 ntBASIC1.93□□□□□ -2.1
RFX3P48380 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AC116165.2-201ENST00000616705 206 ntBASIC1.93□□□□□ -2.1
RFX3P48380 MIR5739-201ENST00000619803 80 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AL162373.1-201ENST00000620433 407 ntBASIC1.93□□□□□ -2.1
RFX3P48380 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AC009878.1-201ENST00000621819 340 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AL359757.2-201ENST00000624309 274 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AP003400.5-201ENST00000624827 617 ntBASIC1.93□□□□□ -2.1
RFX3P48380 AL359851.1-201ENST00000569460 4997 ntBASIC1.93□□□□□ -2.1
RFX3P48380 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
RFX3P48380 AC009487.4-201ENST00000624969 3585 ntBASIC1.93□□□□□ -2.1
RFX3P48380 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RFX3P48380 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
RFX3P48380 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.92□□□□□ -2.1
RFX3P48380 RNU6-190P-201ENST00000384154 102 ntBASIC1.92□□□□□ -2.1
RFX3P48380 MIR17-201ENST00000385012 84 ntBASIC1.92□□□□□ -2.1
RFX3P48380 EDDM3CP-201ENST00000415977 425 ntBASIC1.92□□□□□ -2.1
RFX3P48380 AL353621.1-201ENST00000418219 243 ntBASIC1.92□□□□□ -2.1
RFX3P48380 MTND4P20-201ENST00000424125 869 ntBASIC1.92□□□□□ -2.1
RFX3P48380 AIMP1P2-201ENST00000425294 312 ntBASIC1.92□□□□□ -2.1
RFX3P48380 AC027124.2-201ENST00000428249 105 ntBASIC1.92□□□□□ -2.1
RFX3P48380 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.92□□□□□ -2.1
RFX3P48380 AL353706.1-201ENST00000436728 494 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms