Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 RNA5SP385-201ENST00000515947 110 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 SNORA31.19-201ENST00000517079 126 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 RNA5SP380-201ENST00000517190 98 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 MTCO2P4-201ENST00000517968 247 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.46□□□□□ -2.02
TNFRSF4P43489 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.46□□□□□ -2.02
TNFRSF4P43489 AL157871.3-201ENST00000557231 293 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 MIR1273C-201ENST00000578669 77 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 MIR4648-201ENST00000580107 72 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 NDUFA8P1-201ENST00000605525 367 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 AC103810.6-201ENST00000606708 136 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 Z99129.1-201ENST00000612510 255 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 AC005332.10-201ENST00000612725 619 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
TNFRSF4P43489 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
TNFRSF4P43489 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
TNFRSF4P43489 AC006020.1-201ENST00000420179 1854 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TNFRSF4P43489 RNA5SP432-201ENST00000362480 116 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 Y_RNA.33-201ENST00000362591 102 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 SNORD114-30-201ENST00000364448 72 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 Y_RNA.296-201ENST00000364930 108 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 RNU6-395P-201ENST00000365662 106 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 RNU5A-6P-201ENST00000384136 116 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 MIR504-201ENST00000385065 83 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 MIR147B-201ENST00000390185 80 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 RN7SKP223-201ENST00000410582 62 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 RNU2-66P-201ENST00000410650 161 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 MTCO3P41-201ENST00000414801 328 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 MTND3P17-201ENST00000416968 344 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 PTGES3P4-201ENST00000426243 356 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC133104.1-201ENST00000429100 218 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 AL078601.1-201ENST00000444542 271 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC079448.1-201ENST00000449377 373 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC003071.1-201ENST00000451219 789 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC092001.1-201ENST00000453012 261 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 RPS3AP17-201ENST00000472594 777 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 EIF4EP3-201ENST00000498782 656 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC026436.1-201ENST00000510537 270 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC108078.2-201ENST00000510750 236 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 RPPH1-2P-201ENST00000516688 293 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 ADI1P3-201ENST00000549509 470 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 MIR4506-201ENST00000584693 77 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC091152.3-201ENST00000604227 325 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AL158032.1-201ENST00000605401 106 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC046143.2-201ENST00000609789 160 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC099842.1-201ENST00000619919 596 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 AC092447.7-201ENST00000422212 1621 ntBASIC2.45□□□□□ -2.02
TNFRSF4P43489 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
TNFRSF4P43489 Y_RNA.517-201ENST00000384551 106 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 SNORA41-201ENST00000384675 132 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 OR51A5P-201ENST00000415429 942 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 PIGFP2-201ENST00000421400 651 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 RN7SL297P-201ENST00000483161 293 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 RNU6-581P-201ENST00000516214 105 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 SNORA31.6-201ENST00000516241 130 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 RNA5SP281-201ENST00000516504 135 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 BTF3P12-201ENST00000519620 469 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 LINC00933-203ENST00000559812 219 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 MIR1273D-201ENST00000577266 86 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 AL356280.1-201ENST00000603614 379 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 AL136363.2-201ENST00000604173 851 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 MIR6134-201ENST00000617606 109 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 AC024940.5-201ENST00000622889 474 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 MTND5P30-201ENST00000452896 1731 ntBASIC2.44□□□□□ -2.02
TNFRSF4P43489 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
TNFRSF4P43489 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TNFRSF4P43489 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.43□□□□□ -2.02
TNFRSF4P43489 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TNFRSF4P43489 AC080128.1-201ENST00000474389 1917 ntBASIC2.43□□□□□ -2.02
TNFRSF4P43489 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.43□□□□□ -2.02
TNFRSF4P43489 RNU6-1280P-201ENST00000365211 107 ntBASIC2.43□□□□□ -2.02
TNFRSF4P43489 RNU6-169P-201ENST00000365336 107 ntBASIC2.43□□□□□ -2.02
TNFRSF4P43489 RNU6-282P-201ENST00000365357 103 ntBASIC2.43□□□□□ -2.02
TNFRSF4P43489 U8.9-201ENST00000365667 134 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms