Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CLIP1P30622 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CLIP1P30622 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.44□□□□□ -2.34
CLIP1P30622 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.44□□□□□ -2.34
CLIP1P30622 MTND4P6-201ENST00000438297 472 ntBASIC0.44□□□□□ -2.34
CLIP1P30622 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.44□□□□□ -2.34
CLIP1P30622 SNORD124-201ENST00000459577 104 ntBASIC0.44□□□□□ -2.34
CLIP1P30622 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.44□□□□□ -2.34
CLIP1P30622 MIR4636-201ENST00000582271 80 ntBASIC0.44□□□□□ -2.34
CLIP1P30622 AC146944.4-201ENST00000602697 718 ntBASIC0.44□□□□□ -2.34
CLIP1P30622 MTND4LP5-201ENST00000605152 292 ntBASIC0.44□□□□□ -2.34
CLIP1P30622 AL021879.1-201ENST00000611756 288 ntBASIC0.44□□□□□ -2.34
CLIP1P30622 AC008498.1-201ENST00000613012 531 ntBASIC0.44□□□□□ -2.34
CLIP1P30622 RNU6-31P-201ENST00000384388 108 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 MIR1283-2-201ENST00000408621 87 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 MIR1303-201ENST00000408625 86 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 AC007742.1-201ENST00000425789 329 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 ELOCP26-201ENST00000436067 329 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 AC097499.1-201ENST00000444277 208 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 AC023512.1-201ENST00000444513 499 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.43□□□□□ -2.34
CLIP1P30622 RPL31P53-201ENST00000457065 348 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.43□□□□□ -2.34
CLIP1P30622 AC010900.2-201ENST00000604508 210 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 AL121652.1-201ENST00000608851 448 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.43□□□□□ -2.34
CLIP1P30622 AC090772.4-201ENST00000623599 362 ntBASIC0.43□□□□□ -2.34
CLIP1P30622 AC100821.1-201ENST00000523153 2479 ntBASIC0.42□□□□□ -2.34
CLIP1P30622 Y_RNA.60-201ENST00000362831 98 ntBASIC0.42□□□□□ -2.34
CLIP1P30622 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
CLIP1P30622 RNA5SP299-201ENST00000391203 116 ntBASIC0.42□□□□□ -2.34
CLIP1P30622 MTND4LP10-201ENST00000435146 291 ntBASIC0.42□□□□□ -2.34
CLIP1P30622 TAAR7P-201ENST00000436141 242 ntBASIC0.42□□□□□ -2.34
CLIP1P30622 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.42□□□□□ -2.34
CLIP1P30622 RNU6-1095P-201ENST00000516148 108 ntBASIC0.42□□□□□ -2.34
CLIP1P30622 AC005832.3-201ENST00000537929 631 ntBASIC0.42□□□□□ -2.34
CLIP1P30622 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.42□□□□□ -2.34
CLIP1P30622 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.42□□□□□ -2.34
CLIP1P30622 AL049641.1-201ENST00000441055 1948 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 MIR506-201ENST00000384998 124 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 MIR329-2-201ENST00000385029 84 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 RNU2-63P-201ENST00000410792 194 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.41□□□□□ -2.34
CLIP1P30622 RAC1P7-201ENST00000445367 377 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.41□□□□□ -2.34
CLIP1P30622 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.41□□□□□ -2.34
CLIP1P30622 AC091435.1-201ENST00000505442 584 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 RNU6-1282P-201ENST00000516735 96 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 AC067904.2-201ENST00000517322 1283 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.41□□□□□ -2.34
CLIP1P30622 AC008751.2-201ENST00000597885 980 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 AC006213.4-201ENST00000616184 634 ntBASIC0.41□□□□□ -2.34
CLIP1P30622 RNU6-730P-201ENST00000383954 104 ntBASIC0.4□□□□□ -2.34
CLIP1P30622 MIR1912-201ENST00000410389 80 ntBASIC0.4□□□□□ -2.34
CLIP1P30622 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.4□□□□□ -2.34
CLIP1P30622 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.4□□□□□ -2.34
CLIP1P30622 AL049734.2-201ENST00000441066 616 ntBASIC0.4□□□□□ -2.34
CLIP1P30622 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.4□□□□□ -2.34
CLIP1P30622 AL353691.1-201ENST00000451332 387 ntBASIC0.4□□□□□ -2.34
CLIP1P30622 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.4□□□□□ -2.34
CLIP1P30622 AC087477.1-201ENST00000465747 340 ntBASIC0.4□□□□□ -2.34
CLIP1P30622 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.4□□□□□ -2.34
CLIP1P30622 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.4□□□□□ -2.34
CLIP1P30622 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC0.4□□□□□ -2.34
CLIP1P30622 AC007151.1-201ENST00000572774 483 ntBASIC0.4□□□□□ -2.34
CLIP1P30622 AC055876.5-201ENST00000605667 259 ntBASIC0.4□□□□□ -2.34
CLIP1P30622 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.4□□□□□ -2.34
CLIP1P30622 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.4□□□□□ -2.35
CLIP1P30622 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CLIP1P30622 SNORA4.1-201ENST00000364263 144 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 USP9YP26-201ENST00000421008 661 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 USP9YP18-201ENST00000425912 695 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 ZNF863P-201ENST00000426746 417 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 USP9YP24-201ENST00000434374 697 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 USP9YP17-201ENST00000444617 696 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.39□□□□□ -2.35
CLIP1P30622 HSPE1P13-201ENST00000451143 297 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 LARP1BP2-201ENST00000486594 519 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 AC111193.1-201ENST00000504097 155 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.39□□□□□ -2.35
CLIP1P30622 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.39□□□□□ -2.35
CLIP1P30622 DEFB108D-201ENST00000527787 222 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.39□□□□□ -2.35
CLIP1P30622 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.39□□□□□ -2.35
CLIP1P30622 AC125611.1-201ENST00000549563 229 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 AC026271.5-201ENST00000577873 130 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 AL078604.3-201ENST00000615580 211 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 AC134026.1-201ENST00000623249 2239 ntBASIC0.39□□□□□ -2.35
CLIP1P30622 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.39□□□□□ -2.35
CLIP1P30622 SNORD115-3-201ENST00000363100 82 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 Y_RNA.390-201ENST00000383932 102 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 MIR32-201ENST00000384965 70 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 RPS27P16-201ENST00000425758 201 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC024082.2-201ENST00000434771 238 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC004865.1-201ENST00000442276 1003 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AL592447.1-201ENST00000447592 540 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.38□□□□□ -2.35
CLIP1P30622 AC114982.1-201ENST00000469402 321 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 RPS26P55-201ENST00000471178 356 ntBASIC0.38□□□□□ -2.35
CLIP1P30622 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms