Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 RNU4-46P-201ENST00000410818 138 ntBASIC2.55□□□□□ -2
PSMB4P28070 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.55□□□□□ -2
PSMB4P28070 MTATP6P18-201ENST00000417994 673 ntBASIC2.55□□□□□ -2
PSMB4P28070 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.55□□□□□ -2
PSMB4P28070 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.55□□□□□ -2
PSMB4P28070 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.55□□□□□ -2
PSMB4P28070 MTAPP1-201ENST00000489154 819 ntBASIC2.55□□□□□ -2
PSMB4P28070 RPS27P27-201ENST00000498779 255 ntBASIC2.55□□□□□ -2
PSMB4P28070 AC091133.4-201ENST00000511142 308 ntBASIC2.55□□□□□ -2
PSMB4P28070 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
PSMB4P28070 ACA59.2-201ENST00000517061 156 ntBASIC2.55□□□□□ -2
PSMB4P28070 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.55□□□□□ -2
PSMB4P28070 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.55□□□□□ -2
PSMB4P28070 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.55□□□□□ -2
PSMB4P28070 AC004486.1-201ENST00000546846 233 ntBASIC2.55□□□□□ -2
PSMB4P28070 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.55□□□□□ -2
PSMB4P28070 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.55□□□□□ -2
PSMB4P28070 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.55□□□□□ -2
PSMB4P28070 DEFB131E-202ENST00000602581 683 ntBASIC2.55□□□□□ -2
PSMB4P28070 AL356575.1-201ENST00000603008 283 ntBASIC2.55□□□□□ -2
PSMB4P28070 AL449363.1-201ENST00000617815 186 ntBASIC2.55□□□□□ -2
PSMB4P28070 AC092656.1-203ENST00000624134 423 ntBASIC2.55□□□□□ -2
PSMB4P28070 AL359740.1-201ENST00000624340 592 ntBASIC2.55□□□□□ -2
PSMB4P28070 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.55□□□□□ -2
PSMB4P28070 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PSMB4P28070 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
PSMB4P28070 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
PSMB4P28070 AL109809.4-201ENST00000603520 2185 ntBASIC2.54□□□□□ -2
PSMB4P28070 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
PSMB4P28070 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.54□□□□□ -2
PSMB4P28070 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.54□□□□□ -2
PSMB4P28070 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.54□□□□□ -2
PSMB4P28070 SNORA25.6-201ENST00000364121 118 ntBASIC2.54□□□□□ -2
PSMB4P28070 SNORD14B-201ENST00000364533 90 ntBASIC2.54□□□□□ -2
PSMB4P28070 Y_RNA.359-201ENST00000365498 102 ntBASIC2.54□□□□□ -2
PSMB4P28070 RNU6-1179P-201ENST00000384667 107 ntBASIC2.54□□□□□ -2
PSMB4P28070 RNU6-550P-201ENST00000391057 101 ntBASIC2.54□□□□□ -2
PSMB4P28070 AL663109.1-201ENST00000411498 844 ntBASIC2.54□□□□□ -2
PSMB4P28070 AL353621.1-201ENST00000418219 243 ntBASIC2.54□□□□□ -2
PSMB4P28070 AC063976.3-201ENST00000426849 329 ntBASIC2.54□□□□□ -2
PSMB4P28070 AC073464.1-201ENST00000429823 534 ntBASIC2.54□□□□□ -2
PSMB4P28070 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.54□□□□□ -2
PSMB4P28070 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
PSMB4P28070 AL360271.2-201ENST00000447710 161 ntBASIC2.54□□□□□ -2
PSMB4P28070 MTND1P18-201ENST00000448191 573 ntBASIC2.54□□□□□ -2
PSMB4P28070 AC108938.1-201ENST00000451204 136 ntBASIC2.54□□□□□ -2
PSMB4P28070 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.54□□□□□ -2
PSMB4P28070 RNA5SP320-201ENST00000516263 124 ntBASIC2.54□□□□□ -2
PSMB4P28070 RNU5B-3P-201ENST00000516601 115 ntBASIC2.54□□□□□ -2
PSMB4P28070 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.54□□□□□ -2
PSMB4P28070 MIR3670-2-201ENST00000582974 65 ntBASIC2.54□□□□□ -2
PSMB4P28070 MIR3670-1-201ENST00000584160 65 ntBASIC2.54□□□□□ -2
PSMB4P28070 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
PSMB4P28070 MIR3670-3-201ENST00000584855 65 ntBASIC2.54□□□□□ -2
PSMB4P28070 AL359198.2-201ENST00000611836 194 ntBASIC2.54□□□□□ -2
PSMB4P28070 MIR3670-4-201ENST00000612260 65 ntBASIC2.54□□□□□ -2
PSMB4P28070 AC138627.2-201ENST00000624202 601 ntBASIC2.54□□□□□ -2
PSMB4P28070 AC092608.2-201ENST00000624427 218 ntBASIC2.54□□□□□ -2
PSMB4P28070 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PSMB4P28070 HSPA8P4-201ENST00000511877 1920 ntBASIC2.54□□□□□ -2
PSMB4P28070 AC092447.7-201ENST00000422212 1621 ntBASIC2.53□□□□□ -2
PSMB4P28070 AL359854.1-201ENST00000614203 1594 ntBASIC2.53□□□□□ -2
PSMB4P28070 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.53□□□□□ -2
PSMB4P28070 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.53□□□□□ -2
PSMB4P28070 Y_RNA.296-201ENST00000364930 108 ntBASIC2.53□□□□□ -2
PSMB4P28070 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PSMB4P28070 RNU6-116P-201ENST00000384042 109 ntBASIC2.53□□□□□ -2
PSMB4P28070 RNU6-1029P-201ENST00000384109 107 ntBASIC2.53□□□□□ -2
PSMB4P28070 AL031121.1-201ENST00000406553 254 ntBASIC2.53□□□□□ -2
PSMB4P28070 RNU2-29P-201ENST00000410423 189 ntBASIC2.53□□□□□ -2
PSMB4P28070 RPL21P90-201ENST00000415692 466 ntBASIC2.53□□□□□ -2
PSMB4P28070 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.53□□□□□ -2
PSMB4P28070 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.53□□□□□ -2
PSMB4P28070 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.53□□□□□ -2
PSMB4P28070 RPS12P2-201ENST00000439728 269 ntBASIC2.53□□□□□ -2
PSMB4P28070 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.53□□□□□ -2
PSMB4P28070 AC006026.2-201ENST00000457376 180 ntBASIC2.53□□□□□ -2
PSMB4P28070 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.53□□□□□ -2
PSMB4P28070 RPL22P13-201ENST00000493291 347 ntBASIC2.53□□□□□ -2
PSMB4P28070 AC108078.1-201ENST00000508073 725 ntBASIC2.53□□□□□ -2
PSMB4P28070 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.53□□□□□ -2
PSMB4P28070 LRRC34P2-201ENST00000514850 553 ntBASIC2.53□□□□□ -2
PSMB4P28070 SNORA31.6-201ENST00000516241 130 ntBASIC2.53□□□□□ -2
PSMB4P28070 RNU6-405P-201ENST00000516637 110 ntBASIC2.53□□□□□ -2
PSMB4P28070 BTF3P12-201ENST00000519620 469 ntBASIC2.53□□□□□ -2
PSMB4P28070 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.53□□□□□ -2
PSMB4P28070 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.53□□□□□ -2
PSMB4P28070 MIR3117-201ENST00000584034 78 ntBASIC2.53□□□□□ -2
PSMB4P28070 AC060766.3-201ENST00000591442 263 ntBASIC2.53□□□□□ -2
PSMB4P28070 AL356280.1-201ENST00000603614 379 ntBASIC2.53□□□□□ -2
PSMB4P28070 AC025449.1-201ENST00000603896 529 ntBASIC2.53□□□□□ -2
PSMB4P28070 AL670379.10-201ENST00000604330 253 ntBASIC2.53□□□□□ -2
PSMB4P28070 AL670379.9-201ENST00000605428 253 ntBASIC2.53□□□□□ -2
PSMB4P28070 NDUFA8P1-201ENST00000605525 367 ntBASIC2.53□□□□□ -2
PSMB4P28070 RMST_4.1-201ENST00000616886 107 ntBASIC2.53□□□□□ -2
PSMB4P28070 SCARNA4-202ENST00000625402 129 ntBASIC2.53□□□□□ -2
PSMB4P28070 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.53□□□□□ -2
PSMB4P28070 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
PSMB4P28070 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.53□□□□□ -2
PSMB4P28070 MTND4P27-201ENST00000450813 1354 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms