Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL078596.1-201ENST00000624856 447 ntBASIC3.56□□□□□ -1.84
CD40P25942 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40P25942 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40P25942 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.56□□□□□ -1.84
CD40P25942 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CD40P25942 AC008669.1-201ENST00000565823 2178 ntBASIC3.56□□□□□ -1.84
CD40P25942 AC007256.1-201ENST00000392253 2765 ntBASIC3.56□□□□□ -1.84
CD40P25942 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CD40P25942 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
CD40P25942 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.55□□□□□ -1.84
CD40P25942 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CD40P25942 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.55□□□□□ -1.84
CD40P25942 RNU6-450P-201ENST00000364654 107 ntBASIC3.55□□□□□ -1.84
CD40P25942 Y_RNA.389-201ENST00000383924 113 ntBASIC3.55□□□□□ -1.84
CD40P25942 Y_RNA.455-201ENST00000384230 98 ntBASIC3.55□□□□□ -1.84
CD40P25942 MIR3074-201ENST00000384885 81 ntBASIC3.55□□□□□ -1.84
CD40P25942 AC023141.4-201ENST00000412031 328 ntBASIC3.55□□□□□ -1.84
CD40P25942 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.55□□□□□ -1.84
CD40P25942 AC007098.1-201ENST00000420122 367 ntBASIC3.55□□□□□ -1.84
CD40P25942 AL161651.1-201ENST00000440882 223 ntBASIC3.55□□□□□ -1.84
CD40P25942 AL031659.1-201ENST00000447075 539 ntBASIC3.55□□□□□ -1.84
CD40P25942 AC012308.1-201ENST00000451232 178 ntBASIC3.55□□□□□ -1.84
CD40P25942 RPL29P14-201ENST00000495837 428 ntBASIC3.55□□□□□ -1.84
CD40P25942 ACA59.2-201ENST00000517061 156 ntBASIC3.55□□□□□ -1.84
CD40P25942 AL590705.4-201ENST00000532209 134 ntBASIC3.55□□□□□ -1.84
CD40P25942 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.55□□□□□ -1.84
CD40P25942 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.55□□□□□ -1.84
CD40P25942 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.55□□□□□ -1.84
CD40P25942 AC106785.1-201ENST00000565935 262 ntBASIC3.55□□□□□ -1.84
CD40P25942 MIR5684-201ENST00000585074 65 ntBASIC3.55□□□□□ -1.84
CD40P25942 AC012531.5-201ENST00000611375 151 ntBASIC3.55□□□□□ -1.84
CD40P25942 MIR4272-201ENST00000635924 64 ntBASIC3.55□□□□□ -1.84
CD40P25942 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD40P25942 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.55□□□□□ -1.84
CD40P25942 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CD40P25942 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.55□□□□□ -1.84
CD40P25942 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CD40P25942 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.54□□□□□ -1.84
CD40P25942 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.54□□□□□ -1.84
CD40P25942 RNA5SP295-201ENST00000362655 121 ntBASIC3.54□□□□□ -1.84
CD40P25942 Y_RNA.133-201ENST00000363428 110 ntBASIC3.54□□□□□ -1.84
CD40P25942 Y_RNA.144-201ENST00000363521 113 ntBASIC3.54□□□□□ -1.84
CD40P25942 SNORA37-201ENST00000384504 129 ntBASIC3.54□□□□□ -1.84
CD40P25942 Y_RNA.605-201ENST00000410577 105 ntBASIC3.54□□□□□ -1.84
CD40P25942 RNU2-49P-201ENST00000410666 184 ntBASIC3.54□□□□□ -1.84
CD40P25942 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.54□□□□□ -1.84
CD40P25942 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.54□□□□□ -1.84
CD40P25942 MTCO3P29-201ENST00000432119 779 ntBASIC3.54□□□□□ -1.84
CD40P25942 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.54□□□□□ -1.84
CD40P25942 AC007969.2-201ENST00000441891 191 ntBASIC3.54□□□□□ -1.84
CD40P25942 AC112492.4-201ENST00000456549 352 ntBASIC3.54□□□□□ -1.84
CD40P25942 SNRPGP7-201ENST00000469016 106 ntBASIC3.54□□□□□ -1.84
CD40P25942 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.54□□□□□ -1.84
CD40P25942 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.54□□□□□ -1.84
CD40P25942 RNU6-475P-201ENST00000516073 104 ntBASIC3.54□□□□□ -1.84
CD40P25942 SNORA31.23-201ENST00000517219 133 ntBASIC3.54□□□□□ -1.84
CD40P25942 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.54□□□□□ -1.84
CD40P25942 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.54□□□□□ -1.84
CD40P25942 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.54□□□□□ -1.84
CD40P25942 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.54□□□□□ -1.84
CD40P25942 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.54□□□□□ -1.84
CD40P25942 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.54□□□□□ -1.84
CD40P25942 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.54□□□□□ -1.84
CD40P25942 MIR6875-201ENST00000617506 72 ntBASIC3.54□□□□□ -1.84
CD40P25942 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CD40P25942 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.54□□□□□ -1.84
CD40P25942 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD40P25942 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.54□□□□□ -1.84
CD40P25942 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CD40P25942 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CD40P25942 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.53□□□□□ -1.84
CD40P25942 RNA5SP388-201ENST00000362584 119 ntBASIC3.53□□□□□ -1.84
CD40P25942 Y_RNA.424-201ENST00000384063 103 ntBASIC3.53□□□□□ -1.84
CD40P25942 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CD40P25942 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.53□□□□□ -1.84
CD40P25942 OR2AQ1P-201ENST00000451972 200 ntBASIC3.53□□□□□ -1.84
CD40P25942 RNU7-23P-201ENST00000459465 62 ntBASIC3.53□□□□□ -1.84
CD40P25942 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
CD40P25942 RPL30P10-201ENST00000488148 337 ntBASIC3.53□□□□□ -1.84
CD40P25942 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.53□□□□□ -1.84
CD40P25942 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.53□□□□□ -1.84
CD40P25942 AC091874.1-201ENST00000511402 339 ntBASIC3.53□□□□□ -1.84
CD40P25942 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.53□□□□□ -1.84
CD40P25942 RNU5F-8P-201ENST00000515941 111 ntBASIC3.53□□□□□ -1.84
CD40P25942 MRPS36P4-201ENST00000534436 298 ntBASIC3.53□□□□□ -1.84
CD40P25942 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.53□□□□□ -1.84
CD40P25942 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms