Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC127391.1-201ENST00000411737 98 ntBASIC1.75□□□□□ -2.13
USF1P22415 HMGB3P2-201ENST00000411913 584 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.75□□□□□ -2.13
USF1P22415 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.75□□□□□ -2.13
USF1P22415 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.75□□□□□ -2.13
USF1P22415 RPL37P21-201ENST00000435890 276 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.75□□□□□ -2.13
USF1P22415 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.75□□□□□ -2.13
USF1P22415 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.75□□□□□ -2.13
USF1P22415 AC009238.1-201ENST00000442165 424 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.75□□□□□ -2.13
USF1P22415 AC009237.6-201ENST00000446969 424 ntBASIC1.75□□□□□ -2.13
USF1P22415 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.75□□□□□ -2.13
USF1P22415 HMGN2P23-201ENST00000456759 269 ntBASIC1.75□□□□□ -2.13
USF1P22415 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.75□□□□□ -2.13
USF1P22415 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.75□□□□□ -2.13
USF1P22415 RPS3AP22-201ENST00000488297 769 ntBASIC1.75□□□□□ -2.13
USF1P22415 FAM92A1P2-202ENST00000504766 877 ntBASIC1.75□□□□□ -2.13
USF1P22415 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.75□□□□□ -2.13
USF1P22415 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.75□□□□□ -2.13
USF1P22415 AC116347.2-201ENST00000514912 523 ntBASIC1.75□□□□□ -2.13
USF1P22415 RNU6-311P-201ENST00000516224 102 ntBASIC1.75□□□□□ -2.13
USF1P22415 RN7SKP219-201ENST00000516825 296 ntBASIC1.75□□□□□ -2.13
USF1P22415 RNU6-678P-201ENST00000516832 109 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.75□□□□□ -2.13
USF1P22415 AC011979.2-201ENST00000527568 352 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.75□□□□□ -2.13
USF1P22415 MIR4999-201ENST00000585029 91 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.75□□□□□ -2.13
USF1P22415 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.75□□□□□ -2.13
USF1P22415 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.75□□□□□ -2.13
USF1P22415 AP001981.2-201ENST00000603241 418 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC092106.3-201ENST00000611308 722 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC130324.3-201ENST00000614165 542 ntBASIC1.75□□□□□ -2.13
USF1P22415 AC006338.1-201ENST00000618453 749 ntBASIC1.75□□□□□ -2.13
USF1P22415 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
USF1P22415 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USF1P22415 AL391994.1-201ENST00000254724 282 ntBASIC1.74□□□□□ -2.13
USF1P22415 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USF1P22415 Y_RNA.33-201ENST00000362591 102 ntBASIC1.74□□□□□ -2.13
USF1P22415 RNY4P16-201ENST00000364768 94 ntBASIC1.74□□□□□ -2.13
USF1P22415 RNU6-946P-201ENST00000383878 107 ntBASIC1.74□□□□□ -2.13
USF1P22415 MIR583-201ENST00000384846 75 ntBASIC1.74□□□□□ -2.13
USF1P22415 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
USF1P22415 U8.13-201ENST00000390842 128 ntBASIC1.74□□□□□ -2.13
USF1P22415 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USF1P22415 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USF1P22415 AL133475.1-201ENST00000404414 305 ntBASIC1.74□□□□□ -2.13
USF1P22415 AL008987.1-201ENST00000415528 237 ntBASIC1.74□□□□□ -2.13
USF1P22415 EDDM3CP-201ENST00000415977 425 ntBASIC1.74□□□□□ -2.13
USF1P22415 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.74□□□□□ -2.13
USF1P22415 RPS27AP14-201ENST00000422868 454 ntBASIC1.74□□□□□ -2.13
USF1P22415 AL160275.3-201ENST00000423876 471 ntBASIC1.74□□□□□ -2.13
USF1P22415 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.74□□□□□ -2.13
USF1P22415 RPL7P54-201ENST00000438336 674 ntBASIC1.74□□□□□ -2.13
USF1P22415 SDR42E1P3-201ENST00000438345 502 ntBASIC1.74□□□□□ -2.13
USF1P22415 AL603825.1-201ENST00000438481 80 ntBASIC1.74□□□□□ -2.13
USF1P22415 RPL22P17-201ENST00000438729 315 ntBASIC1.74□□□□□ -2.13
USF1P22415 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.74□□□□□ -2.13
USF1P22415 FABP5P13-201ENST00000452144 328 ntBASIC1.74□□□□□ -2.13
USF1P22415 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.74□□□□□ -2.13
USF1P22415 AC055731.1-201ENST00000474387 401 ntBASIC1.74□□□□□ -2.13
USF1P22415 RPL7P43-201ENST00000478876 753 ntBASIC1.74□□□□□ -2.13
USF1P22415 AC140059.1-201ENST00000489238 361 ntBASIC1.74□□□□□ -2.13
USF1P22415 AC034244.1-201ENST00000507687 207 ntBASIC1.74□□□□□ -2.13
USF1P22415 MTND4P2-201ENST00000507767 1203 ntBASIC1.74□□□□□ -2.13
USF1P22415 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.74□□□□□ -2.13
USF1P22415 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.74□□□□□ -2.13
USF1P22415 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.74□□□□□ -2.13
USF1P22415 AC107934.1-201ENST00000522215 217 ntBASIC1.74□□□□□ -2.13
USF1P22415 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.74□□□□□ -2.13
USF1P22415 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
USF1P22415 PSMA3P-201ENST00000555485 635 ntBASIC1.74□□□□□ -2.13
USF1P22415 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
USF1P22415 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.74□□□□□ -2.13
USF1P22415 AC078899.2-201ENST00000595282 212 ntBASIC1.74□□□□□ -2.13
USF1P22415 AC011494.1-201ENST00000596454 237 ntBASIC1.74□□□□□ -2.13
USF1P22415 AC087045.1-201ENST00000605856 382 ntBASIC1.74□□□□□ -2.13
USF1P22415 AC107952.2-201ENST00000606048 486 ntBASIC1.74□□□□□ -2.13
USF1P22415 AC096772.1-201ENST00000609146 564 ntBASIC1.74□□□□□ -2.13
USF1P22415 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
USF1P22415 AP001486.3-201ENST00000615334 372 ntBASIC1.74□□□□□ -2.13
USF1P22415 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
USF1P22415 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.74□□□□□ -2.13
USF1P22415 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.74□□□□□ -2.13
USF1P22415 AL356266.1-201ENST00000623311 483 ntBASIC1.74□□□□□ -2.13
USF1P22415 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.74□□□□□ -2.13
USF1P22415 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.74□□□□□ -2.13
USF1P22415 AP000553.5-201ENST00000641933 54 ntBASIC1.74□□□□□ -2.13
USF1P22415 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.73□□□□□ -2.13
USF1P22415 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.73□□□□□ -2.13
USF1P22415 HSPE1P11-201ENST00000339579 310 ntBASIC1.73□□□□□ -2.13
USF1P22415 RNU6-395P-201ENST00000365662 106 ntBASIC1.73□□□□□ -2.13
USF1P22415 RNU6-190P-201ENST00000384154 102 ntBASIC1.73□□□□□ -2.13
USF1P22415 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
USF1P22415 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.73□□□□□ -2.13
USF1P22415 RPL23AP39-201ENST00000415533 405 ntBASIC1.73□□□□□ -2.13
USF1P22415 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.73□□□□□ -2.13
USF1P22415 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.73□□□□□ -2.13
USF1P22415 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms