Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LMNB1P20700 USP9YP7-201ENST00000436723 430 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 DAP3P1-201ENST00000441522 278 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 HMGN2P21-201ENST00000447764 270 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 USP9YP32-201ENST00000452432 430 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.64□□□□□ -1.67
LMNB1P20700 RPL17P19-201ENST00000489069 552 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 AC025445.1-201ENST00000502728 300 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 AC023141.12-201ENST00000512399 199 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 AC090281.1-201ENST00000523019 276 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.64□□□□□ -1.67
LMNB1P20700 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.64□□□□□ -1.67
LMNB1P20700 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.64□□□□□ -1.67
LMNB1P20700 AL158827.2-201ENST00000602494 330 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.64□□□□□ -1.67
LMNB1P20700 RNU6-6P-201ENST00000606623 107 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 AC064801.1-201ENST00000612025 407 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 uc_338.32-201ENST00000615087 172 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 AL691447.3-201ENST00000635020 330 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 MIR4272-201ENST00000635924 64 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.64□□□□□ -1.67
LMNB1P20700 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.64□□□□□ -1.67
LMNB1P20700 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMNB1P20700 AC068254.2-201ENST00000623938 3577 ntBASIC4.64□□□□□ -1.67
LMNB1P20700 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LMNB1P20700 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.64□□□□□ -1.67
LMNB1P20700 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMNB1P20700 NCAPGP1-201ENST00000505112 1814 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LMNB1P20700 SNORD14B-201ENST00000364533 90 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 MT-TG-201ENST00000387429 68 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 SNORA48.5-201ENST00000391143 135 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 MIR1183-201ENST00000408856 89 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 RPL27AP8-201ENST00000424277 446 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 RPL21P10-201ENST00000463521 490 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 RPS20P22-201ENST00000473700 357 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.63□□□□□ -1.67
LMNB1P20700 RN7SKP83-201ENST00000516512 178 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 Y_RNA.721-201ENST00000517207 102 ntBASIC4.63□□□□□ -1.67
LMNB1P20700 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.63□□□□□ -1.67
LMNB1P20700 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMNB1P20700 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.63□□□□□ -1.67
LMNB1P20700 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMNB1P20700 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.63□□□□□ -1.67
LMNB1P20700 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.63□□□□□ -1.67
LMNB1P20700 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.63□□□□□ -1.67
LMNB1P20700 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMNB1P20700 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMNB1P20700 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMNB1P20700 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMNB1P20700 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
LMNB1P20700 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMNB1P20700 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMNB1P20700 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMNB1P20700 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.62□□□□□ -1.67
LMNB1P20700 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMNB1P20700 Y_RNA.39-201ENST00000362620 98 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 RNU6-1317P-201ENST00000364582 104 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 RNA5SP167-201ENST00000365461 116 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 Y_RNA.510-201ENST00000384511 114 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AL138885.1-201ENST00000405921 675 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 U3.42-201ENST00000408746 214 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 RNU6-101P-201ENST00000410323 104 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 PGBD4P6-201ENST00000421501 610 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 NDUFB4P7-201ENST00000423198 363 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.62□□□□□ -1.67
LMNB1P20700 AC092573.2-201ENST00000434546 243 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AC010469.1-201ENST00000463864 576 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AC139453.3-201ENST00000493276 369 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.62□□□□□ -1.67
LMNB1P20700 RNA5SP154-201ENST00000516193 111 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 RNU6-794P-201ENST00000517261 64 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LMNB1P20700 HSBP1P1-201ENST00000555205 166 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AC012493.2-201ENST00000595083 291 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AC015813.4-201ENST00000610469 179 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AC107871.2-201ENST00000612894 502 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 AL355810.1-201ENST00000614629 552 ntBASIC4.62□□□□□ -1.67
LMNB1P20700 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.62□□□□□ -1.67
LMNB1P20700 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.62□□□□□ -1.67
LMNB1P20700 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMNB1P20700 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMNB1P20700 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LMNB1P20700 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.61□□□□□ -1.67
LMNB1P20700 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMNB1P20700 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.61□□□□□ -1.67
LMNB1P20700 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMNB1P20700 Y_RNA.188-201ENST00000363952 111 ntBASIC4.61□□□□□ -1.67
LMNB1P20700 RNU4-42P-201ENST00000364738 142 ntBASIC4.61□□□□□ -1.67
LMNB1P20700 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMNB1P20700 SNORA3C-201ENST00000408792 125 ntBASIC4.61□□□□□ -1.67
LMNB1P20700 RNU6-1156P-201ENST00000410365 100 ntBASIC4.61□□□□□ -1.67
LMNB1P20700 SNORD56-201ENST00000413522 71 ntBASIC4.61□□□□□ -1.67
LMNB1P20700 AL096701.2-201ENST00000416920 238 ntBASIC4.61□□□□□ -1.67
LMNB1P20700 AC005300.1-201ENST00000428401 373 ntBASIC4.61□□□□□ -1.67
LMNB1P20700 AC007919.1-201ENST00000429380 217 ntBASIC4.61□□□□□ -1.67
LMNB1P20700 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.61□□□□□ -1.67
LMNB1P20700 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.61□□□□□ -1.67
LMNB1P20700 AL583843.1-201ENST00000456070 346 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms