Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC091152.2-201ENST00000591628 2569 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 AC110491.1-201ENST00000562191 2010 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 AC007656.2-201ENST00000624902 4547 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ERCC3P19447 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 RNU1-100P-201ENST00000365255 165 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 U8.8-201ENST00000365399 135 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 RNU6-692P-201ENST00000384496 107 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 MIR30B-201ENST00000384850 88 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 MIR606-201ENST00000384851 96 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
ERCC3P19447 RNU6-55P-201ENST00000411092 107 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 BPY2DP-201ENST00000422208 265 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.63□□□□□ -1.67
ERCC3P19447 CYCSP32-201ENST00000440548 321 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 MTND4P19-201ENST00000446659 478 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.63□□□□□ -1.67
ERCC3P19447 SNRPGP7-201ENST00000469016 106 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 AC069499.1-201ENST00000489433 509 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.63□□□□□ -1.67
ERCC3P19447 RN7SKP295-201ENST00000517264 153 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.63□□□□□ -1.67
ERCC3P19447 AC021739.1-201ENST00000559631 174 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 CYP4A43P-201ENST00000568156 121 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 CPDP1-201ENST00000579660 283 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.63□□□□□ -1.67
ERCC3P19447 AL360085.1-201ENST00000604713 532 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.63□□□□□ -1.67
ERCC3P19447 AC006157.1-201ENST00000611750 366 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 AC064801.1-201ENST00000612025 407 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 HMGB1P24-202ENST00000615653 685 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.63□□□□□ -1.67
ERCC3P19447 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ERCC3P19447 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ERCC3P19447 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ERCC3P19447 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.62□□□□□ -1.67
ERCC3P19447 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.62□□□□□ -1.67
ERCC3P19447 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ERCC3P19447 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ERCC3P19447 SNORD56.1-201ENST00000362913 68 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 RNU6-490P-201ENST00000362985 107 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 Y_RNA.463-201ENST00000384271 102 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 MIR591-201ENST00000385290 95 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.62□□□□□ -1.67
ERCC3P19447 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.62□□□□□ -1.67
ERCC3P19447 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.62□□□□□ -1.67
ERCC3P19447 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.62□□□□□ -1.67
ERCC3P19447 NIPA2P5-201ENST00000452282 464 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 AL031183.1-201ENST00000457667 207 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 RN7SL323P-201ENST00000494712 295 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.62□□□□□ -1.67
ERCC3P19447 AC116655.1-201ENST00000508324 901 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 RNU6-327P-201ENST00000516270 127 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 SNORA31.18-201ENST00000517043 134 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.62□□□□□ -1.67
ERCC3P19447 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.62□□□□□ -1.67
ERCC3P19447 AC024153.1-201ENST00000603103 365 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 AC005034.5-201ENST00000604219 466 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 MIR8076-201ENST00000611401 83 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 AC083806.3-201ENST00000614016 455 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.62□□□□□ -1.67
ERCC3P19447 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.62□□□□□ -1.67
ERCC3P19447 MTND5P30-201ENST00000452896 1731 ntBASIC4.62□□□□□ -1.67
ERCC3P19447 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ERCC3P19447 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ERCC3P19447 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
ERCC3P19447 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ERCC3P19447 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.62□□□□□ -1.67
ERCC3P19447 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
ERCC3P19447 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ERCC3P19447 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.61□□□□□ -1.67
ERCC3P19447 SNORD35B-201ENST00000363660 87 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 RNU6-105P-201ENST00000363909 104 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 RNA5SP387-201ENST00000364226 106 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 Y_RNA.428-201ENST00000384078 102 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 RNA5SP252-201ENST00000391131 119 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 FTH1P15-201ENST00000406984 280 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 RN7SKP156-201ENST00000410308 342 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.61□□□□□ -1.67
ERCC3P19447 PMCHL1-202ENST00000423102 261 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 AL160004.2-201ENST00000432935 350 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 AL137792.2-201ENST00000443484 235 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 AL035666.1-201ENST00000446195 348 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 HMGN2P10-201ENST00000448085 265 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 MRPL42P6-201ENST00000486397 371 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.61□□□□□ -1.67
ERCC3P19447 RNU7-143P-201ENST00000516781 65 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 CBX3P8-201ENST00000532412 525 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.61□□□□□ -1.67
ERCC3P19447 SNORA51-201ENST00000606420 132 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.61□□□□□ -1.67
ERCC3P19447 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ERCC3P19447 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.61□□□□□ -1.67
ERCC3P19447 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ERCC3P19447 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ERCC3P19447 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.61□□□□□ -1.67
ERCC3P19447 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
ERCC3P19447 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.6□□□□□ -1.67
ERCC3P19447 RNU6-1115P-201ENST00000362490 106 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms