Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AC026403.1-201ENST00000518938 295 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 MIR4643-201ENST00000577473 78 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 AC007179.3-201ENST00000604976 235 ntBASIC5.4□□□□□ -1.54
CSB-PGBD3P0DP91 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CSB-PGBD3P0DP91 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CSB-PGBD3P0DP91 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CSB-PGBD3P0DP91 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.4□□□□□ -1.55
CSB-PGBD3P0DP91 AC116096.1-201ENST00000566804 2314 ntBASIC5.4□□□□□ -1.55
CSB-PGBD3P0DP91 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 AC126323.6-202ENST00000568092 3511 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 RNU1-76P-201ENST00000362903 159 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 Y_RNA.592-201ENST00000410274 109 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 RN7SKP167-201ENST00000411047 285 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 ABCF2P2-201ENST00000450549 296 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 AL136097.1-201ENST00000456945 913 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 KC877373.1-201ENST00000479066 408 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 Y_RNA.713-201ENST00000517013 96 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 AC087441.2-201ENST00000529141 262 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 AP002770.2-201ENST00000543613 532 ntBASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CSB-PGBD3P0DP91 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 MIR412-201ENST00000362142 91 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 U8.11-201ENST00000384699 133 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 U8.12-201ENST00000384701 133 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 SNORA69.1-201ENST00000390904 137 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 AL358472.1-201ENST00000431295 329 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 U8.18-201ENST00000459285 133 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 RNU7-120P-201ENST00000459334 63 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 PPIAP15-201ENST00000479662 484 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 RPL31P13-201ENST00000484151 370 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 AC074198.2-201ENST00000508153 258 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 AC005921.1-201ENST00000510589 286 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 RNU6-1338P-201ENST00000516328 91 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 RNA5SP179-201ENST00000517284 121 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 TRAV32-201ENST00000553993 340 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 MIR5701-3-201ENST00000578890 82 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 CPDP1-201ENST00000579660 283 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 MIR5701-1-201ENST00000585138 82 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 MIR5701-2-201ENST00000615634 82 ntBASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CSB-PGBD3P0DP91 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 NCAPGP1-201ENST00000505112 1814 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 RNU6-682P-201ENST00000363843 106 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 RNA5SP189-201ENST00000364920 115 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 SNORA5A-201ENST00000384111 134 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 Y_RNA.458-201ENST00000384240 102 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 SNORD115-46-201ENST00000390982 71 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AL451074.5-201ENST00000415894 435 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AC073587.1-201ENST00000447093 876 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AC067942.3-201ENST00000512025 362 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AC136932.1-201ENST00000574771 208 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 AL138721.1-201ENST00000616756 179 ntBASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.37□□□□□ -1.55
CSB-PGBD3P0DP91 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 MIR483-201ENST00000385070 76 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 VDAC1P3-201ENST00000434069 851 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AC009237.8-201ENST00000445492 379 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AC023141.12-201ENST00000512399 199 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 SNORA25.14-201ENST00000516481 132 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AP002392.1-201ENST00000537692 208 ntBASIC5.36□□□□□ -1.55
CSB-PGBD3P0DP91 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms