Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.06□□□□□ -2.24
CTSDP07339 DNAJC19P9-201ENST00000555084 351 ntBASIC1.06□□□□□ -2.24
CTSDP07339 AL512347.1-201ENST00000566420 503 ntBASIC1.06□□□□□ -2.24
CTSDP07339 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
CTSDP07339 AC126365.2-201ENST00000580630 379 ntBASIC1.06□□□□□ -2.24
CTSDP07339 AC018638.7-201ENST00000605836 1114 ntBASIC1.06□□□□□ -2.24
CTSDP07339 AC090186.1-201ENST00000605991 572 ntBASIC1.06□□□□□ -2.24
CTSDP07339 RMST_6.1-201ENST00000611980 203 ntBASIC1.06□□□□□ -2.24
CTSDP07339 AL359314.1-201ENST00000616913 261 ntBASIC1.06□□□□□ -2.24
CTSDP07339 AP003485.1-201ENST00000625093 753 ntBASIC1.06□□□□□ -2.24
CTSDP07339 AC091948.2-201ENST00000636510 279 ntBASIC1.06□□□□□ -2.24
CTSDP07339 DDX43P2-201ENST00000604753 1354 ntBASIC1.06□□□□□ -2.24
CTSDP07339 TEX21P-201ENST00000447107 1476 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.05□□□□□ -2.24
CTSDP07339 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.05□□□□□ -2.24
CTSDP07339 RNU6-661P-201ENST00000362409 107 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AL590084.1-201ENST00000407885 387 ntBASIC1.05□□□□□ -2.24
CTSDP07339 RNU4-62P-201ENST00000410125 130 ntBASIC1.05□□□□□ -2.24
CTSDP07339 RNU2-41P-201ENST00000410991 178 ntBASIC1.05□□□□□ -2.24
CTSDP07339 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.05□□□□□ -2.24
CTSDP07339 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.05□□□□□ -2.24
CTSDP07339 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.05□□□□□ -2.24
CTSDP07339 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.05□□□□□ -2.24
CTSDP07339 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 AC104058.1-201ENST00000448028 297 ntBASIC1.05□□□□□ -2.24
CTSDP07339 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.05□□□□□ -2.24
CTSDP07339 FCF1P6-201ENST00000456841 595 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 RNA5SP57-201ENST00000459463 123 ntBASIC1.05□□□□□ -2.24
CTSDP07339 MEMO1P3-201ENST00000459811 302 ntBASIC1.05□□□□□ -2.24
CTSDP07339 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.05□□□□□ -2.24
CTSDP07339 RPL7P43-201ENST00000478876 753 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.05□□□□□ -2.24
CTSDP07339 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.05□□□□□ -2.24
CTSDP07339 AL161670.1-201ENST00000554348 137 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.05□□□□□ -2.24
CTSDP07339 AL132657.2-201ENST00000564417 358 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AL356432.3-201ENST00000568952 465 ntBASIC1.05□□□□□ -2.24
CTSDP07339 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.05□□□□□ -2.24
CTSDP07339 AL670379.10-201ENST00000604330 253 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AL670379.9-201ENST00000605428 253 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AC107952.2-201ENST00000606048 486 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AC096772.1-201ENST00000609146 564 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AL512598.1-201ENST00000610158 273 ntBASIC1.05□□□□□ -2.24
CTSDP07339 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.05□□□□□ -2.24
CTSDP07339 AP003476.1-201ENST00000623984 516 ntBASIC1.05□□□□□ -2.24
CTSDP07339 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.05□□□□□ -2.24
CTSDP07339 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CTSDP07339 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.04□□□□□ -2.24
CTSDP07339 SNORD115-3-201ENST00000363100 82 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RNU6-289P-201ENST00000364093 107 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RNU6-1032P-201ENST00000384100 107 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.04□□□□□ -2.24
CTSDP07339 Y_RNA.578-201ENST00000390903 88 ntBASIC1.04□□□□□ -2.24
CTSDP07339 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.04□□□□□ -2.24
CTSDP07339 AC009310.1-201ENST00000414414 451 ntBASIC1.04□□□□□ -2.24
CTSDP07339 AL953862.1-201ENST00000423016 168 ntBASIC1.04□□□□□ -2.24
CTSDP07339 UBE2V1P4-201ENST00000425374 344 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.04□□□□□ -2.24
CTSDP07339 HMGB1P31-201ENST00000437242 427 ntBASIC1.04□□□□□ -2.24
CTSDP07339 BTBD7P2-201ENST00000441962 620 ntBASIC1.04□□□□□ -2.24
CTSDP07339 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.04□□□□□ -2.24
CTSDP07339 AC245102.2-201ENST00000448956 180 ntBASIC1.04□□□□□ -2.24
CTSDP07339 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.04□□□□□ -2.24
CTSDP07339 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.04□□□□□ -2.24
CTSDP07339 RPS29P29-201ENST00000456396 171 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RNU7-59P-201ENST00000459101 61 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RN7SKP210-201ENST00000459176 261 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RPF2P2-201ENST00000504693 896 ntBASIC1.04□□□□□ -2.24
CTSDP07339 SNORA44.1-201ENST00000517031 108 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RNU6-1028P-201ENST00000517164 93 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RNU6-586P-201ENST00000517265 104 ntBASIC1.04□□□□□ -2.24
CTSDP07339 AP003355.1-201ENST00000518956 587 ntBASIC1.04□□□□□ -2.24
CTSDP07339 CYCSP27-201ENST00000527643 293 ntBASIC1.04□□□□□ -2.24
CTSDP07339 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.04□□□□□ -2.24
CTSDP07339 SUB1P3-201ENST00000564581 315 ntBASIC1.04□□□□□ -2.24
CTSDP07339 MIR4769-201ENST00000584126 77 ntBASIC1.04□□□□□ -2.24
CTSDP07339 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.04□□□□□ -2.24
CTSDP07339 RPL30P11-203ENST00000598995 310 ntBASIC1.04□□□□□ -2.24
CTSDP07339 AC099842.1-201ENST00000619919 596 ntBASIC1.04□□□□□ -2.24
CTSDP07339 U1.36-201ENST00000620684 176 ntBASIC1.04□□□□□ -2.24
CTSDP07339 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.04□□□□□ -2.24
CTSDP07339 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.04□□□□□ -2.24
CTSDP07339 PCMTD1P7-201ENST00000634506 357 ntBASIC1.04□□□□□ -2.24
CTSDP07339 AC099654.9-201ENST00000637055 678 ntBASIC1.04□□□□□ -2.24
CTSDP07339 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.04□□□□□ -2.24
CTSDP07339 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.04□□□□□ -2.24
CTSDP07339 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CTSDP07339 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CTSDP07339 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CTSDP07339 RNU6-853P-201ENST00000364306 107 ntBASIC1.03□□□□□ -2.24
CTSDP07339 RNU6-898P-201ENST00000365627 104 ntBASIC1.03□□□□□ -2.24
CTSDP07339 SNORD26-201ENST00000384147 75 ntBASIC1.03□□□□□ -2.24
CTSDP07339 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms