Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 LRRC37A5P-203ENST00000580181 585 ntBASIC1.97□□□□□ -2.09
SNX4O95219 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX4O95219 AL049777.1-201ENST00000622740 518 ntBASIC1.97□□□□□ -2.09
SNX4O95219 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SNX4O95219 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.96□□□□□ -2.1
SNX4O95219 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNX4O95219 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SNX4O95219 RNU6-529P-201ENST00000363383 104 ntBASIC1.96□□□□□ -2.1
SNX4O95219 RNU6-190P-201ENST00000384154 102 ntBASIC1.96□□□□□ -2.1
SNX4O95219 MIR186-201ENST00000384988 86 ntBASIC1.96□□□□□ -2.1
SNX4O95219 RPL31P63-201ENST00000422565 375 ntBASIC1.96□□□□□ -2.1
SNX4O95219 AL022400.1-201ENST00000423946 935 ntBASIC1.96□□□□□ -2.1
SNX4O95219 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.96□□□□□ -2.1
SNX4O95219 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.96□□□□□ -2.1
SNX4O95219 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX4O95219 RPS29P21-201ENST00000496272 170 ntBASIC1.96□□□□□ -2.1
SNX4O95219 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX4O95219 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SNX4O95219 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
SNX4O95219 DUXAP5-201ENST00000529668 529 ntBASIC1.96□□□□□ -2.1
SNX4O95219 ARL2BPP2-201ENST00000550907 489 ntBASIC1.96□□□□□ -2.1
SNX4O95219 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.96□□□□□ -2.1
SNX4O95219 AC087241.4-201ENST00000612441 480 ntBASIC1.96□□□□□ -2.1
SNX4O95219 AL359314.1-201ENST00000616913 261 ntBASIC1.96□□□□□ -2.1
SNX4O95219 AC010378.1-201ENST00000619270 362 ntBASIC1.96□□□□□ -2.1
SNX4O95219 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.95□□□□□ -2.1
SNX4O95219 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
SNX4O95219 RNU6-511P-201ENST00000363496 107 ntBASIC1.95□□□□□ -2.1
SNX4O95219 RNU5E-6P-201ENST00000365574 115 ntBASIC1.95□□□□□ -2.1
SNX4O95219 RNU6-611P-201ENST00000384276 104 ntBASIC1.95□□□□□ -2.1
SNX4O95219 RNU6-253P-201ENST00000384730 105 ntBASIC1.95□□□□□ -2.1
SNX4O95219 RNU2-36P-201ENST00000410361 191 ntBASIC1.95□□□□□ -2.1
SNX4O95219 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.95□□□□□ -2.1
SNX4O95219 PTENP1-201ENST00000447117 1215 ntBASIC1.95□□□□□ -2.1
SNX4O95219 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX4O95219 AL513124.1-201ENST00000450410 614 ntBASIC1.95□□□□□ -2.1
SNX4O95219 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX4O95219 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX4O95219 AC105185.1-201ENST00000518705 535 ntBASIC1.95□□□□□ -2.1
SNX4O95219 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.95□□□□□ -2.1
SNX4O95219 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX4O95219 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.95□□□□□ -2.1
SNX4O95219 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.95□□□□□ -2.1
SNX4O95219 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNX4O95219 ANP32BP3-201ENST00000559213 706 ntBASIC1.95□□□□□ -2.1
SNX4O95219 AC092325.1-201ENST00000566449 554 ntBASIC1.95□□□□□ -2.1
SNX4O95219 AC093249.1-201ENST00000567049 203 ntBASIC1.95□□□□□ -2.1
SNX4O95219 MIR4298-201ENST00000584380 73 ntBASIC1.95□□□□□ -2.1
SNX4O95219 BNIP3P30-201ENST00000601184 574 ntBASIC1.95□□□□□ -2.1
SNX4O95219 SEPT7P9-203ENST00000604116 343 ntBASIC1.95□□□□□ -2.1
SNX4O95219 AC144521.1-201ENST00000607148 956 ntBASIC1.95□□□□□ -2.1
SNX4O95219 AC130324.3-201ENST00000614165 542 ntBASIC1.95□□□□□ -2.1
SNX4O95219 U1.36-201ENST00000620684 176 ntBASIC1.95□□□□□ -2.1
SNX4O95219 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.95□□□□□ -2.1
SNX4O95219 Y_RNA.46-201ENST00000362695 102 ntBASIC1.94□□□□□ -2.1
SNX4O95219 RNU6-960P-201ENST00000364056 120 ntBASIC1.94□□□□□ -2.1
SNX4O95219 RNA5SP160-201ENST00000364866 120 ntBASIC1.94□□□□□ -2.1
SNX4O95219 RNU6-636P-201ENST00000384598 107 ntBASIC1.94□□□□□ -2.1
SNX4O95219 POLHP1-201ENST00000411806 470 ntBASIC1.94□□□□□ -2.1
SNX4O95219 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX4O95219 EIF4EP2-201ENST00000422816 654 ntBASIC1.94□□□□□ -2.1
SNX4O95219 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX4O95219 AL591719.1-201ENST00000444669 744 ntBASIC1.94□□□□□ -2.1
SNX4O95219 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX4O95219 HMGB1P30-201ENST00000492455 606 ntBASIC1.94□□□□□ -2.1
SNX4O95219 AC134050.1-201ENST00000495088 933 ntBASIC1.94□□□□□ -2.1
SNX4O95219 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX4O95219 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
SNX4O95219 AP004607.1-201ENST00000524456 203 ntBASIC1.94□□□□□ -2.1
SNX4O95219 AC011979.2-201ENST00000527568 352 ntBASIC1.94□□□□□ -2.1
SNX4O95219 CYCSP27-201ENST00000527643 293 ntBASIC1.94□□□□□ -2.1
SNX4O95219 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
SNX4O95219 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX4O95219 AL670379.2-201ENST00000604983 252 ntBASIC1.94□□□□□ -2.1
SNX4O95219 AL670379.4-201ENST00000605279 254 ntBASIC1.94□□□□□ -2.1
SNX4O95219 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.94□□□□□ -2.1
SNX4O95219 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.94□□□□□ -2.1
SNX4O95219 AC099842.1-201ENST00000619919 596 ntBASIC1.94□□□□□ -2.1
SNX4O95219 AP000484.1-201ENST00000620067 1252 ntBASIC1.94□□□□□ -2.1
SNX4O95219 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
SNX4O95219 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.94□□□□□ -2.1
SNX4O95219 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SNX4O95219 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.93□□□□□ -2.1
SNX4O95219 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SNX4O95219 RNU6-546P-201ENST00000383991 107 ntBASIC1.93□□□□□ -2.1
SNX4O95219 SNORA64-201ENST00000384674 134 ntBASIC1.93□□□□□ -2.1
SNX4O95219 RN7SKP32-201ENST00000410167 303 ntBASIC1.93□□□□□ -2.1
SNX4O95219 UBE2V1P10-201ENST00000414685 269 ntBASIC1.93□□□□□ -2.1
SNX4O95219 AC016831.2-201ENST00000417179 352 ntBASIC1.93□□□□□ -2.1
SNX4O95219 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.93□□□□□ -2.1
SNX4O95219 AL365338.1-201ENST00000422282 858 ntBASIC1.93□□□□□ -2.1
SNX4O95219 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.93□□□□□ -2.1
SNX4O95219 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.93□□□□□ -2.1
SNX4O95219 AL118520.1-201ENST00000450770 291 ntBASIC1.93□□□□□ -2.1
SNX4O95219 FCF1P6-201ENST00000456841 595 ntBASIC1.93□□□□□ -2.1
SNX4O95219 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
SNX4O95219 AC104685.1-201ENST00000502445 371 ntBASIC1.93□□□□□ -2.1
SNX4O95219 AC020699.1-201ENST00000505161 445 ntBASIC1.93□□□□□ -2.1
SNX4O95219 AC092436.1-201ENST00000506450 503 ntBASIC1.93□□□□□ -2.1
SNX4O95219 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms