Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RPL22P13-201ENST00000493291 347 ntBASIC2.82□□□□□ -1.96
BEST1O76090 HMGB1P29-201ENST00000505659 499 ntBASIC2.82□□□□□ -1.96
BEST1O76090 AC117522.2-201ENST00000510049 657 ntBASIC2.82□□□□□ -1.96
BEST1O76090 RNA5SP112-201ENST00000515937 99 ntBASIC2.82□□□□□ -1.96
BEST1O76090 RNU5B-3P-201ENST00000516601 115 ntBASIC2.82□□□□□ -1.96
BEST1O76090 RPPH1-2P-201ENST00000516688 293 ntBASIC2.82□□□□□ -1.96
BEST1O76090 SCARNA3-201ENST00000517097 143 ntBASIC2.82□□□□□ -1.96
BEST1O76090 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.82□□□□□ -1.96
BEST1O76090 AC008121.1-201ENST00000603244 268 ntBASIC2.82□□□□□ -1.96
BEST1O76090 AC025449.1-201ENST00000603896 529 ntBASIC2.82□□□□□ -1.96
BEST1O76090 AC006023.1-201ENST00000603944 259 ntBASIC2.82□□□□□ -1.96
BEST1O76090 AC097065.2-201ENST00000608159 533 ntBASIC2.82□□□□□ -1.96
BEST1O76090 AL449363.1-201ENST00000617815 186 ntBASIC2.82□□□□□ -1.96
BEST1O76090 SCARNA4-202ENST00000625402 129 ntBASIC2.82□□□□□ -1.96
BEST1O76090 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.82□□□□□ -1.96
BEST1O76090 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.82□□□□□ -1.96
BEST1O76090 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
BEST1O76090 AC138393.1-203ENST00000327086 343 ntBASIC2.81□□□□□ -1.96
BEST1O76090 RNU6-486P-201ENST00000363116 107 ntBASIC2.81□□□□□ -1.96
BEST1O76090 Y_RNA.296-201ENST00000364930 108 ntBASIC2.81□□□□□ -1.96
BEST1O76090 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
BEST1O76090 RNU6-72P-201ENST00000384285 79 ntBASIC2.81□□□□□ -1.96
BEST1O76090 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.81□□□□□ -1.96
BEST1O76090 RPL21P2-201ENST00000440049 481 ntBASIC2.81□□□□□ -1.96
BEST1O76090 HIGD1AP2-201ENST00000446367 280 ntBASIC2.81□□□□□ -1.96
BEST1O76090 AC006026.2-201ENST00000457376 180 ntBASIC2.81□□□□□ -1.96
BEST1O76090 AL162395.1-201ENST00000457882 422 ntBASIC2.81□□□□□ -1.96
BEST1O76090 RPS29P15-201ENST00000458329 171 ntBASIC2.81□□□□□ -1.96
BEST1O76090 AC006512.1-201ENST00000468816 291 ntBASIC2.81□□□□□ -1.96
BEST1O76090 MRPL42P6-201ENST00000486397 371 ntBASIC2.81□□□□□ -1.96
BEST1O76090 AC023141.11-201ENST00000508864 202 ntBASIC2.81□□□□□ -1.96
BEST1O76090 AC105313.1-201ENST00000509121 353 ntBASIC2.81□□□□□ -1.96
BEST1O76090 SNORA9.3-201ENST00000516383 129 ntBASIC2.81□□□□□ -1.96
BEST1O76090 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.81□□□□□ -1.96
BEST1O76090 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST1O76090 AP004607.1-201ENST00000524456 203 ntBASIC2.81□□□□□ -1.96
BEST1O76090 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST1O76090 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.81□□□□□ -1.96
BEST1O76090 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.81□□□□□ -1.96
BEST1O76090 MIR4703-201ENST00000577728 79 ntBASIC2.81□□□□□ -1.96
BEST1O76090 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.81□□□□□ -1.96
BEST1O76090 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.81□□□□□ -1.96
BEST1O76090 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.81□□□□□ -1.96
BEST1O76090 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST1O76090 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
BEST1O76090 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
BEST1O76090 AC135776.4-201ENST00000624300 1904 ntBASIC2.81□□□□□ -1.96
BEST1O76090 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST1O76090 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST1O76090 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
BEST1O76090 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.8□□□□□ -1.96
BEST1O76090 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST1O76090 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
BEST1O76090 ZNF680P1-201ENST00000436625 1469 ntBASIC2.8□□□□□ -1.96
BEST1O76090 RNU6-859P-201ENST00000362728 107 ntBASIC2.8□□□□□ -1.96
BEST1O76090 SNORA26.7-201ENST00000391288 122 ntBASIC2.8□□□□□ -1.96
BEST1O76090 CIR1P3-201ENST00000405137 479 ntBASIC2.8□□□□□ -1.96
BEST1O76090 FTH1P15-201ENST00000406984 280 ntBASIC2.8□□□□□ -1.96
BEST1O76090 RAP1BP3-201ENST00000407180 549 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AL663109.1-201ENST00000411498 844 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST1O76090 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST1O76090 TOMM20P4-201ENST00000427861 435 ntBASIC2.8□□□□□ -1.96
BEST1O76090 Z98742.2-201ENST00000431564 187 ntBASIC2.8□□□□□ -1.96
BEST1O76090 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST1O76090 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.8□□□□□ -1.96
BEST1O76090 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.8□□□□□ -1.96
BEST1O76090 AL590639.1-201ENST00000456484 337 ntBASIC2.8□□□□□ -1.96
BEST1O76090 TPT1P7-201ENST00000458300 517 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.8□□□□□ -1.96
BEST1O76090 AC091133.4-201ENST00000511142 308 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.8□□□□□ -1.96
BEST1O76090 LRRC34P2-201ENST00000514850 553 ntBASIC2.8□□□□□ -1.96
BEST1O76090 MIR892C-201ENST00000516410 77 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC024909.2-201ENST00000553035 286 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC025678.1-201ENST00000567861 338 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC009163.5-201ENST00000575421 637 ntBASIC2.8□□□□□ -1.96
BEST1O76090 MIR3199-1-201ENST00000582434 88 ntBASIC2.8□□□□□ -1.96
BEST1O76090 RPL12P50-201ENST00000603116 116 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AL021997.1-201ENST00000605757 193 ntBASIC2.8□□□□□ -1.96
BEST1O76090 RPL23AP88-201ENST00000605759 454 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC008536.2-201ENST00000607284 349 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC011890.2-201ENST00000613393 294 ntBASIC2.8□□□□□ -1.96
BEST1O76090 RMST_4.1-201ENST00000616886 107 ntBASIC2.8□□□□□ -1.96
BEST1O76090 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.8□□□□□ -1.96
BEST1O76090 AC010378.1-201ENST00000619270 362 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC244517.12-201ENST00000623581 663 ntBASIC2.8□□□□□ -1.96
BEST1O76090 AC084035.1-201ENST00000634543 607 ntBASIC2.8□□□□□ -1.96
BEST1O76090 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
BEST1O76090 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
BEST1O76090 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.79□□□□□ -1.96
BEST1O76090 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
BEST1O76090 Y_RNA.159-201ENST00000363674 87 ntBASIC2.79□□□□□ -1.96
BEST1O76090 RNU6-384P-201ENST00000364900 104 ntBASIC2.79□□□□□ -1.96
BEST1O76090 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
BEST1O76090 RNU1-109P-201ENST00000383960 147 ntBASIC2.79□□□□□ -1.96
BEST1O76090 RNU6-45P-201ENST00000384471 107 ntBASIC2.79□□□□□ -1.96
BEST1O76090 U6atac.2-201ENST00000408644 118 ntBASIC2.79□□□□□ -1.96
BEST1O76090 RNU2-9P-201ENST00000410194 145 ntBASIC2.79□□□□□ -1.96
BEST1O76090 RNU2-29P-201ENST00000410423 189 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms