Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MIR1246-201ENST00000636535 73 ntBASIC0.03□□□□□ -2.4
USH2AO75445 Y_RNA.533-201ENST00000384596 114 ntBASIC0.03□□□□□ -2.4
USH2AO75445 SNORD71-201ENST00000411292 86 ntBASIC0.03□□□□□ -2.4
USH2AO75445 PDCL2P1-201ENST00000419302 352 ntBASIC0.03□□□□□ -2.4
USH2AO75445 AC241584.1-201ENST00000438469 1241 ntBASIC0.03□□□□□ -2.4
USH2AO75445 SCARNA18-201ENST00000459004 134 ntBASIC0.03□□□□□ -2.4
USH2AO75445 RNU6-775P-201ENST00000459318 96 ntBASIC0.03□□□□□ -2.4
USH2AO75445 SNORD126-201ENST00000459475 77 ntBASIC0.03□□□□□ -2.4
USH2AO75445 MTCO3P35-201ENST00000485582 781 ntBASIC0.03□□□□□ -2.4
USH2AO75445 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.03□□□□□ -2.4
USH2AO75445 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
USH2AO75445 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.03□□□□□ -2.4
USH2AO75445 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.03□□□□□ -2.4
USH2AO75445 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.03□□□□□ -2.4
USH2AO75445 AC074051.3-201ENST00000570238 358 ntBASIC0.03□□□□□ -2.4
USH2AO75445 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.03□□□□□ -2.4
USH2AO75445 RNU6-1082P-201ENST00000364574 107 ntBASIC0.03□□□□□ -2.4
USH2AO75445 RNU6-10P-201ENST00000384036 107 ntBASIC0.03□□□□□ -2.4
USH2AO75445 RNU6-15P-201ENST00000384534 107 ntBASIC0.03□□□□□ -2.4
USH2AO75445 RNA5SP252-201ENST00000391131 119 ntBASIC0.03□□□□□ -2.4
USH2AO75445 MTATP6P7-201ENST00000453315 681 ntBASIC0.03□□□□□ -2.4
USH2AO75445 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.03□□□□□ -2.4
USH2AO75445 COX6CP6-201ENST00000490840 228 ntBASIC0.03□□□□□ -2.4
USH2AO75445 RNA5SP404-201ENST00000517118 132 ntBASIC0.03□□□□□ -2.4
USH2AO75445 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.03□□□□□ -2.4
USH2AO75445 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.03□□□□□ -2.4
USH2AO75445 MIR3165-201ENST00000579874 75 ntBASIC0.03□□□□□ -2.4
USH2AO75445 MIR3117-201ENST00000584034 78 ntBASIC0.03□□□□□ -2.4
USH2AO75445 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.03□□□□□ -2.4
USH2AO75445 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.03□□□□□ -2.4
USH2AO75445 MTND4P14-201ENST00000435799 1354 ntBASIC0.03□□□□□ -2.41
USH2AO75445 SNORA25-201ENST00000384384 134 ntBASIC0.03□□□□□ -2.41
USH2AO75445 AL356421.1-201ENST00000403255 413 ntBASIC0.03□□□□□ -2.41
USH2AO75445 AC096531.1-201ENST00000419107 107 ntBASIC0.03□□□□□ -2.41
USH2AO75445 CASP3P1-201ENST00000446037 609 ntBASIC0.03□□□□□ -2.41
USH2AO75445 AC010683.1-201ENST00000473673 378 ntBASIC0.03□□□□□ -2.41
USH2AO75445 RPL21P47-201ENST00000483696 477 ntBASIC0.03□□□□□ -2.41
USH2AO75445 RPL30P11-201ENST00000495304 339 ntBASIC0.03□□□□□ -2.41
USH2AO75445 AL365204.3-201ENST00000612448 685 ntBASIC0.03□□□□□ -2.41
USH2AO75445 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.03□□□□□ -2.41
USH2AO75445 AL512506.2-201ENST00000624472 458 ntBASIC0.03□□□□□ -2.41
USH2AO75445 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.03□□□□□ -2.41
USH2AO75445 AC245047.7-201ENST00000440265 293 ntBASIC0.02□□□□□ -2.41
USH2AO75445 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.02□□□□□ -2.41
USH2AO75445 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.02□□□□□ -2.41
USH2AO75445 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.02□□□□□ -2.41
USH2AO75445 AC135507.1-201ENST00000607214 561 ntBASIC0.02□□□□□ -2.41
USH2AO75445 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
USH2AO75445 RNA5SP496-201ENST00000391240 109 ntBASIC0.02□□□□□ -2.41
USH2AO75445 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.02□□□□□ -2.41
USH2AO75445 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.02□□□□□ -2.41
USH2AO75445 AC010409.1-201ENST00000487382 476 ntBASIC0.02□□□□□ -2.41
USH2AO75445 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.02□□□□□ -2.41
USH2AO75445 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.02□□□□□ -2.41
USH2AO75445 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.02□□□□□ -2.41
USH2AO75445 MIR4299-201ENST00000577899 72 ntBASIC0.02□□□□□ -2.41
USH2AO75445 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
USH2AO75445 RNA5SP192-201ENST00000364404 120 ntBASIC0.02□□□□□ -2.41
USH2AO75445 AL606495.1-201ENST00000422100 813 ntBASIC0.02□□□□□ -2.41
USH2AO75445 MTND4LP13-201ENST00000425022 298 ntBASIC0.02□□□□□ -2.41
USH2AO75445 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.02□□□□□ -2.41
USH2AO75445 AC015726.3-201ENST00000624501 418 ntBASIC0.02□□□□□ -2.41
USH2AO75445 AP003400.5-201ENST00000624827 617 ntBASIC0.02□□□□□ -2.41
USH2AO75445 RPS15AP5-201ENST00000436276 388 ntBASIC0.02□□□□□ -2.41
USH2AO75445 RNF2P1-201ENST00000442955 1010 ntBASIC0.02□□□□□ -2.41
USH2AO75445 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.02□□□□□ -2.41
USH2AO75445 TPMTP4-201ENST00000450749 678 ntBASIC0.02□□□□□ -2.41
USH2AO75445 AC069277.2-201ENST00000454211 432 ntBASIC0.02□□□□□ -2.41
USH2AO75445 snoU109.2-201ENST00000459316 135 ntBASIC0.02□□□□□ -2.41
USH2AO75445 AL163195.1-201ENST00000496941 348 ntBASIC0.02□□□□□ -2.41
USH2AO75445 MTATP6P9-201ENST00000515039 680 ntBASIC0.02□□□□□ -2.41
USH2AO75445 IGJP1-201ENST00000522682 475 ntBASIC0.02□□□□□ -2.41
USH2AO75445 AC007038.2-201ENST00000608095 740 ntBASIC0.02□□□□□ -2.41
USH2AO75445 RN7SL660P-201ENST00000614852 299 ntBASIC0.02□□□□□ -2.41
USH2AO75445 RNU1-36P-201ENST00000365130 165 ntBASIC0.01□□□□□ -2.41
USH2AO75445 RNU6-40P-201ENST00000384254 107 ntBASIC0.01□□□□□ -2.41
USH2AO75445 RNU6-348P-201ENST00000384386 107 ntBASIC0.01□□□□□ -2.41
USH2AO75445 VN1R36P-201ENST00000414936 291 ntBASIC0.01□□□□□ -2.41
USH2AO75445 USP9YP18-201ENST00000425912 695 ntBASIC0.01□□□□□ -2.41
USH2AO75445 OR2AQ1P-201ENST00000451972 200 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.01□□□□□ -2.41
USH2AO75445 AP003066.2-201ENST00000529375 555 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.01□□□□□ -2.41
USH2AO75445 MIR3115-201ENST00000577915 68 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC008739.2-201ENST00000597006 317 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AL132822.1-201ENST00000617063 513 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC010615.1-201ENST00000594254 1764 ntBASIC0.01□□□□□ -2.41
USH2AO75445 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.01□□□□□ -2.41
USH2AO75445 RNA5SP275-201ENST00000363936 118 ntBASIC0.01□□□□□ -2.41
USH2AO75445 ARPC3P5-201ENST00000448802 534 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC134050.1-201ENST00000495088 933 ntBASIC0.01□□□□□ -2.41
USH2AO75445 RNU6-732P-201ENST00000516033 103 ntBASIC0.01□□□□□ -2.41
USH2AO75445 RNU6-1247P-201ENST00000516622 98 ntBASIC0.01□□□□□ -2.41
USH2AO75445 RNU6-362P-201ENST00000516736 90 ntBASIC0.01□□□□□ -2.41
USH2AO75445 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC0.01□□□□□ -2.41
USH2AO75445 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC0.01□□□□□ -2.41
USH2AO75445 AC021749.1-201ENST00000604322 607 ntBASIC0.01□□□□□ -2.41
USH2AO75445 AC004492.1-201ENST00000607036 742 ntBASIC0.01□□□□□ -2.41
USH2AO75445 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.01□□□□□ -2.41
USH2AO75445 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms