Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC108729.1-201ENST00000487812 947 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC079395.1-201ENST00000510981 262 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC091965.2-201ENST00000512324 613 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.65□□□□□ -2.15
SHOX2O60902 AC112198.4-201ENST00000515450 351 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 SNORA48.11-201ENST00000517015 89 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 RNU6-1183P-201ENST00000517054 60 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.65□□□□□ -2.15
SHOX2O60902 AC084851.1-201ENST00000529105 249 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.65□□□□□ -2.15
SHOX2O60902 AC012213.3-201ENST00000577199 777 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.65□□□□□ -2.15
SHOX2O60902 AL031274.2-201ENST00000599419 203 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC008121.3-201ENST00000618726 433 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 AC013470.4-201ENST00000619978 986 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 LINC02211-204ENST00000642024 1070 ntBASIC1.65□□□□□ -2.15
SHOX2O60902 MTND5P33-201ENST00000571250 1450 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 RNU1-72P-201ENST00000362976 153 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 RNU6-413P-201ENST00000384115 107 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 RNU6-298P-201ENST00000390888 96 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AL356432.1-201ENST00000405809 419 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 RN7SKP266-201ENST00000410232 287 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AL359704.1-201ENST00000411586 781 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 USP9YP33-201ENST00000412220 421 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AC083875.1-201ENST00000419509 405 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.64□□□□□ -2.15
SHOX2O60902 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.64□□□□□ -2.15
SHOX2O60902 USP9YP35-201ENST00000435696 412 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 RPS15AP9-201ENST00000439856 381 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.64□□□□□ -2.15
SHOX2O60902 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.64□□□□□ -2.15
SHOX2O60902 RPF2P2-201ENST00000504693 896 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 SUMO2P5-201ENST00000506790 245 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 RNU6-581P-201ENST00000516214 105 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.64□□□□□ -2.15
SHOX2O60902 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHOX2O60902 AC110588.1-201ENST00000559699 137 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 LINC00933-203ENST00000559812 219 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 MIR4452-201ENST00000583004 71 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AC009974.1-201ENST00000608881 455 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AC112204.3-201ENST00000623822 332 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 U6.99-201ENST00000637524 83 ntBASIC1.64□□□□□ -2.15
SHOX2O60902 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.64□□□□□ -2.15
SHOX2O60902 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SHOX2O60902 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHOX2O60902 AC138393.1-203ENST00000327086 343 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 RNU6-1280P-201ENST00000365211 107 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 Y_RNA.433-201ENST00000384089 102 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SHOX2O60902 AC068050.1-201ENST00000394891 380 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AC069282.1-201ENST00000411911 526 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AL158823.1-201ENST00000418441 478 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.63□□□□□ -2.15
SHOX2O60902 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.63□□□□□ -2.15
SHOX2O60902 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.63□□□□□ -2.15
SHOX2O60902 RPL23AP6-201ENST00000446637 472 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 EEF1E1P1-201ENST00000446998 430 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 MTCO1P27-201ENST00000448269 226 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.63□□□□□ -2.15
SHOX2O60902 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.63□□□□□ -2.15
SHOX2O60902 AC139453.3-201ENST00000493276 369 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.63□□□□□ -2.15
SHOX2O60902 RNU6-143P-201ENST00000516942 93 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 ACA59.2-201ENST00000517061 156 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AC107953.1-201ENST00000522216 297 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.63□□□□□ -2.15
SHOX2O60902 AC026271.5-201ENST00000577873 130 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 MIR4782-201ENST00000577987 79 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AC087045.1-201ENST00000605856 382 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AC092953.2-201ENST00000608000 699 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AC103710.2-201ENST00000609912 942 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AL773524.1-201ENST00000614065 229 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.63□□□□□ -2.15
SHOX2O60902 MIR7974-201ENST00000615835 79 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AC017037.3-201ENST00000625016 472 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 AP000776.1-201ENST00000530032 1663 ntBASIC1.63□□□□□ -2.15
SHOX2O60902 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHOX2O60902 RNU6-188P-201ENST00000364207 107 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 RNU6-777P-201ENST00000364265 104 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 U3.13-201ENST00000364804 214 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 SNORA25B-201ENST00000365507 128 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SHOX2O60902 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.62□□□□□ -2.15
SHOX2O60902 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.62□□□□□ -2.15
SHOX2O60902 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SHOX2O60902 AC112771.1-201ENST00000463581 102 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 AC023194.1-201ENST00000493084 308 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.62□□□□□ -2.15
SHOX2O60902 AC116655.1-201ENST00000508324 901 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SHOX2O60902 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SHOX2O60902 AP005660.1-201ENST00000522972 293 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 OR5AL2P-201ENST00000532185 920 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 HSBP1P1-201ENST00000555205 166 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 AC243960.4-201ENST00000600532 288 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.62□□□□□ -2.15
SHOX2O60902 AC090970.3-201ENST00000612566 866 ntBASIC1.62□□□□□ -2.15
SHOX2O60902 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms