Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RNU6-1220P-201ENST00000517126 108 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 OR5AL2P-201ENST00000532185 920 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AP000867.2-201ENST00000532468 320 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.81□□□□□ -1.96
CACNA1FO60840 SNRPGP18-201ENST00000553000 214 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC090615.1-201ENST00000577519 154 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 MIR4474-201ENST00000579189 78 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AP001029.3-201ENST00000588063 596 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC011712.1-201ENST00000588959 234 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AL670379.6-201ENST00000603753 252 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AL670379.11-201ENST00000604059 253 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC008162.1-201ENST00000604718 254 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AL670379.1-201ENST00000604752 252 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AL670379.5-201ENST00000605253 252 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AL670379.12-201ENST00000605291 253 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AL670379.8-201ENST00000605353 252 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AL670379.7-201ENST00000605823 252 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.81□□□□□ -1.96
CACNA1FO60840 AC130324.3-201ENST00000614165 542 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CACNA1FO60840 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CACNA1FO60840 RNU4-79P-201ENST00000362764 141 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 RNU1-51P-201ENST00000365345 176 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.81□□□□□ -1.96
CACNA1FO60840 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CACNA1FO60840 MIR591-201ENST00000385290 95 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AL356432.1-201ENST00000405809 419 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.81□□□□□ -1.96
CACNA1FO60840 RNU2-47P-201ENST00000410649 186 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 RPL21P66-201ENST00000426566 466 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 TRIAP1P1-201ENST00000427062 225 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 RPL23AP30-201ENST00000432419 501 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CACNA1FO60840 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.81□□□□□ -1.96
CACNA1FO60840 AL513124.1-201ENST00000450410 614 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 RNU7-63P-201ENST00000459054 62 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.81□□□□□ -1.96
CACNA1FO60840 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CACNA1FO60840 AC008413.1-201ENST00000511864 177 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 Y_RNA.701-201ENST00000516812 110 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC018630.1-201ENST00000541376 925 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 ARL2BPP2-201ENST00000550907 489 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.81□□□□□ -1.96
CACNA1FO60840 AL627309.6-201ENST00000606857 840 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 AC004908.2-201ENST00000609090 574 ntBASIC2.81□□□□□ -1.96
CACNA1FO60840 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CACNA1FO60840 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.8□□□□□ -1.96
CACNA1FO60840 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CACNA1FO60840 RNU6-97P-201ENST00000363387 104 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 SNORD37.1-201ENST00000390968 65 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.8□□□□□ -1.96
CACNA1FO60840 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.8□□□□□ -1.96
CACNA1FO60840 RPS24P6-201ENST00000452670 400 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 IGKV3-31-201ENST00000523109 329 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.8□□□□□ -1.96
CACNA1FO60840 AC005668.1-201ENST00000571142 476 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 GLUD1P4-201ENST00000590914 418 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC005261.5-201ENST00000596280 355 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC078795.3-201ENST00000602913 472 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC113139.1-201ENST00000605049 239 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC087045.1-201ENST00000605856 382 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 RNU6-89P-201ENST00000606519 100 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.8□□□□□ -1.96
CACNA1FO60840 AC064836.2-201ENST00000609491 462 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC090617.10-201ENST00000624308 134 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 MTND1P37-201ENST00000636562 264 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.8□□□□□ -1.96
CACNA1FO60840 AL138713.1-201ENST00000624026 2130 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC006026.1-201ENST00000444025 1803 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CACNA1FO60840 RNU5A-8P-201ENST00000364102 114 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AL356057.2-201ENST00000403318 432 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AL023284.1-201ENST00000403956 276 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 MTCO2P29-201ENST00000465212 189 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC104472.2-201ENST00000469035 601 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 EIF4EP3-201ENST00000498782 656 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.8□□□□□ -1.96
CACNA1FO60840 AC103851.1-201ENST00000506833 274 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CACNA1FO60840 AC114786.4-201ENST00000508771 728 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.8□□□□□ -1.96
CACNA1FO60840 RNU4-49P-201ENST00000516080 140 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 RN7SKP219-201ENST00000516825 296 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.8□□□□□ -1.96
CACNA1FO60840 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.8□□□□□ -1.96
CACNA1FO60840 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.8□□□□□ -1.96
CACNA1FO60840 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.8□□□□□ -1.96
CACNA1FO60840 HIF1AP1-201ENST00000553642 175 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC018638.8-201ENST00000588755 281 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 AC007742.2-201ENST00000618226 398 ntBASIC2.8□□□□□ -1.96
CACNA1FO60840 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.79□□□□□ -1.96
CACNA1FO60840 AC103988.1-201ENST00000566382 2177 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 AC009902.3-201ENST00000606235 2172 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 HSPE1P11-201ENST00000339579 310 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 SNORD81.2-201ENST00000365153 76 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CACNA1FO60840 RNU6-837P-201ENST00000391056 108 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 SSXP10-201ENST00000402595 565 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 MIR1261-201ENST00000408659 82 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 OR9R1P-201ENST00000412200 877 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms