Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.33□□□□□ -1.56
ACTN4O43707 AP001328.1-201ENST00000528550 176 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 AC109810.1-201ENST00000534066 224 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 LARP7P3-201ENST00000579888 337 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 AC209154.1-201ENST00000582156 337 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 AL356157.2-201ENST00000605122 111 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 AP002799.1-201ENST00000623552 423 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTN4O43707 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTN4O43707 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTN4O43707 AC107068.1-201ENST00000563286 4218 ntBASIC5.33□□□□□ -1.56
ACTN4O43707 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.33□□□□□ -1.56
ACTN4O43707 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTN4O43707 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ACTN4O43707 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTN4O43707 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 RNA5SP123-201ENST00000363244 119 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 snoU2_19.4-201ENST00000364329 80 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 Y_RNA.525-201ENST00000384570 113 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 MIR153-1-201ENST00000384914 90 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 RNU2-54P-201ENST00000410299 190 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 RN7SKP125-201ENST00000410481 302 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ACTN4O43707 AC112220.1-201ENST00000434628 355 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 AC112498.1-201ENST00000444401 332 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 SNRPGP7-201ENST00000469016 106 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 RPSAP50-201ENST00000481955 852 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 RNA5SP291-201ENST00000517222 105 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.32□□□□□ -1.56
ACTN4O43707 AC008033.2-201ENST00000542626 177 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 AC090049.2-201ENST00000550377 109 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 AC105129.1-201ENST00000560250 297 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.32□□□□□ -1.56
ACTN4O43707 AL354798.1-201ENST00000622505 329 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
ACTN4O43707 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 AC093535.2-201ENST00000624769 2326 ntBASIC5.32□□□□□ -1.56
ACTN4O43707 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.32□□□□□ -1.56
ACTN4O43707 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
ACTN4O43707 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ACTN4O43707 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTN4O43707 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ACTN4O43707 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.31□□□□□ -1.56
ACTN4O43707 RNU1-82P-201ENST00000390851 165 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 MIR1178-201ENST00000408396 91 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 AL356867.1-201ENST00000429623 299 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.31□□□□□ -1.56
ACTN4O43707 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.31□□□□□ -1.56
ACTN4O43707 RN7SL629P-201ENST00000489622 285 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 SCARNA22-201ENST00000503991 125 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.31□□□□□ -1.56
ACTN4O43707 RNA5SP54-201ENST00000516951 92 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.31□□□□□ -1.56
ACTN4O43707 MTND5P34-201ENST00000568888 325 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 AC136624.4-201ENST00000573044 370 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 MIR5571-201ENST00000577998 113 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 AC005086.4-201ENST00000623065 213 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 AC091905.4-201ENST00000623432 202 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 AP001340.1-201ENST00000624405 217 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ACTN4O43707 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ACTN4O43707 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ACTN4O43707 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ACTN4O43707 INTS6P1-201ENST00000504674 2530 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.31□□□□□ -1.56
ACTN4O43707 AC026951.1-201ENST00000559530 2459 ntBASIC5.31□□□□□ -1.56
ACTN4O43707 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.31□□□□□ -1.56
ACTN4O43707 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ACTN4O43707 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ACTN4O43707 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
ACTN4O43707 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ACTN4O43707 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.3□□□□□ -1.56
ACTN4O43707 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ACTN4O43707 Y_RNA.179-201ENST00000363844 90 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 Y_RNA.329-201ENST00000365209 107 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 RNA5SP89-201ENST00000410300 108 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 RN7SKP213-201ENST00000410746 298 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 AC009963.1-201ENST00000417265 157 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 RPS12P23-201ENST00000419579 400 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 Z74021.1-201ENST00000423610 407 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 PSMD10P3-201ENST00000437000 448 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 AL451050.1-201ENST00000450126 415 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 snoU13.20-201ENST00000459180 104 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 AC092991.1-201ENST00000477176 376 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 KC877373.1-201ENST00000479066 408 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 RN7SL214P-201ENST00000487317 265 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 RN7SL808P-201ENST00000496066 299 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 UBE2CP3-201ENST00000502715 450 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 RNU6-589P-201ENST00000516485 107 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 NACAP3-201ENST00000552100 481 ntBASIC5.3□□□□□ -1.56
ACTN4O43707 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms