Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.21□□□□□ -1.9
MSI1O43347 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MSI1O43347 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MSI1O43347 MIR422A-201ENST00000362286 90 ntBASIC3.21□□□□□ -1.9
MSI1O43347 RNU6-1252P-201ENST00000363054 104 ntBASIC3.21□□□□□ -1.9
MSI1O43347 Y_RNA.301-201ENST00000364990 103 ntBASIC3.21□□□□□ -1.9
MSI1O43347 SNORD15B-201ENST00000384714 146 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
MSI1O43347 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.21□□□□□ -1.9
MSI1O43347 MYL8P-204ENST00000431574 518 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AL365400.1-201ENST00000431854 640 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AL512844.2-201ENST00000433990 593 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.21□□□□□ -1.9
MSI1O43347 NDUFA5P4-201ENST00000436704 385 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.21□□□□□ -1.9
MSI1O43347 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.21□□□□□ -1.9
MSI1O43347 AP001486.1-201ENST00000463339 476 ntBASIC3.21□□□□□ -1.9
MSI1O43347 RPL7P43-201ENST00000478876 753 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AC139453.3-201ENST00000493276 369 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.21□□□□□ -1.9
MSI1O43347 SNORA19.2-201ENST00000516013 114 ntBASIC3.21□□□□□ -1.9
MSI1O43347 SNORA14.1-201ENST00000516113 141 ntBASIC3.21□□□□□ -1.9
MSI1O43347 RNU6-143P-201ENST00000516942 93 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AC009902.1-201ENST00000519351 183 ntBASIC3.21□□□□□ -1.9
MSI1O43347 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.21□□□□□ -1.9
MSI1O43347 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.21□□□□□ -1.9
MSI1O43347 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.21□□□□□ -1.9
MSI1O43347 AC005498.1-201ENST00000592125 465 ntBASIC3.21□□□□□ -1.9
MSI1O43347 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.21□□□□□ -1.9
MSI1O43347 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.21□□□□□ -1.9
MSI1O43347 AL132765.2-201ENST00000610812 351 ntBASIC3.21□□□□□ -1.9
MSI1O43347 FAM157A-202ENST00000615155 405 ntBASIC3.21□□□□□ -1.9
MSI1O43347 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.21□□□□□ -1.9
MSI1O43347 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
MSI1O43347 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MSI1O43347 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MSI1O43347 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.21□□□□□ -1.9
MSI1O43347 AC090740.1-201ENST00000623193 2262 ntBASIC3.21□□□□□ -1.9
MSI1O43347 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
MSI1O43347 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
MSI1O43347 ZNF807-201ENST00000328088 1707 ntBASIC3.2□□□□□ -1.9
MSI1O43347 Y_RNA.33-201ENST00000362591 102 ntBASIC3.2□□□□□ -1.9
MSI1O43347 SNORD3E-201ENST00000362899 217 ntBASIC3.2□□□□□ -1.9
MSI1O43347 RNU6-254P-201ENST00000363377 107 ntBASIC3.2□□□□□ -1.9
MSI1O43347 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.2□□□□□ -1.9
MSI1O43347 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.2□□□□□ -1.9
MSI1O43347 Y_RNA.509-201ENST00000384506 99 ntBASIC3.2□□□□□ -1.9
MSI1O43347 MT-TD-201ENST00000387419 68 ntBASIC3.2□□□□□ -1.9
MSI1O43347 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.2□□□□□ -1.9
MSI1O43347 HMGB1P18-201ENST00000438801 619 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.2□□□□□ -1.9
MSI1O43347 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.2□□□□□ -1.9
MSI1O43347 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.2□□□□□ -1.9
MSI1O43347 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.2□□□□□ -1.9
MSI1O43347 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.2□□□□□ -1.9
MSI1O43347 PPP1R2P5-201ENST00000457256 603 ntBASIC3.2□□□□□ -1.9
MSI1O43347 RPS23P3-201ENST00000470993 430 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.2□□□□□ -1.9
MSI1O43347 FGF7P4-201ENST00000509595 295 ntBASIC3.2□□□□□ -1.9
MSI1O43347 RNU1-86P-201ENST00000516108 154 ntBASIC3.2□□□□□ -1.9
MSI1O43347 RNU1-107P-201ENST00000516617 154 ntBASIC3.2□□□□□ -1.9
MSI1O43347 RNA5SP165-201ENST00000517142 115 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.2□□□□□ -1.9
MSI1O43347 AC009812.2-201ENST00000517657 457 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.2□□□□□ -1.9
MSI1O43347 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.2□□□□□ -1.9
MSI1O43347 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.2□□□□□ -1.9
MSI1O43347 MIR5692A1-201ENST00000580523 69 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.2□□□□□ -1.9
MSI1O43347 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.2□□□□□ -1.9
MSI1O43347 AC004805.2-201ENST00000605382 482 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AC002044.1-201ENST00000606707 158 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AL591516.1-201ENST00000611326 274 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AC027309.3-201ENST00000623419 351 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AC022140.2-201ENST00000623500 188 ntBASIC3.2□□□□□ -1.9
MSI1O43347 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
MSI1O43347 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
MSI1O43347 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
MSI1O43347 AL359693.1-201ENST00000614959 2407 ntBASIC3.19□□□□□ -1.9
MSI1O43347 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
MSI1O43347 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
MSI1O43347 RNU4-73P-201ENST00000363164 141 ntBASIC3.19□□□□□ -1.9
MSI1O43347 SNORD113-7-201ENST00000363762 77 ntBASIC3.19□□□□□ -1.9
MSI1O43347 RNU2-3P-201ENST00000410144 191 ntBASIC3.19□□□□□ -1.9
MSI1O43347 RNU6-1025P-201ENST00000410629 104 ntBASIC3.19□□□□□ -1.9
MSI1O43347 CYCSP33-201ENST00000414485 327 ntBASIC3.19□□□□□ -1.9
MSI1O43347 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.19□□□□□ -1.9
MSI1O43347 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.19□□□□□ -1.9
MSI1O43347 SNRPEP9-201ENST00000436794 238 ntBASIC3.19□□□□□ -1.9
MSI1O43347 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.19□□□□□ -1.9
MSI1O43347 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.19□□□□□ -1.9
MSI1O43347 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.19□□□□□ -1.9
MSI1O43347 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
MSI1O43347 RNU1-61P-201ENST00000516107 151 ntBASIC3.19□□□□□ -1.9
MSI1O43347 RNU6-277P-201ENST00000516272 106 ntBASIC3.19□□□□□ -1.9
MSI1O43347 Y_RNA.691-201ENST00000516611 103 ntBASIC3.19□□□□□ -1.9
MSI1O43347 RNU6-1069P-201ENST00000516612 133 ntBASIC3.19□□□□□ -1.9
MSI1O43347 RNU6-1088P-201ENST00000516850 104 ntBASIC3.19□□□□□ -1.9
MSI1O43347 SNORA25.17-201ENST00000517184 124 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms