Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 AC121333.1-201ENST00000567488 2709 ntBASIC3.38□□□□□ -1.87
CTIFO43310 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
CTIFO43310 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.38□□□□□ -1.87
CTIFO43310 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTIFO43310 Y_RNA.167-201ENST00000363735 109 ntBASIC3.38□□□□□ -1.87
CTIFO43310 U3.12-201ENST00000364498 214 ntBASIC3.38□□□□□ -1.87
CTIFO43310 SNORA5A-201ENST00000384111 134 ntBASIC3.38□□□□□ -1.87
CTIFO43310 SNORA1.3-201ENST00000384676 136 ntBASIC3.38□□□□□ -1.87
CTIFO43310 MIR578-201ENST00000384828 96 ntBASIC3.38□□□□□ -1.87
CTIFO43310 MIR491-201ENST00000384877 84 ntBASIC3.38□□□□□ -1.87
CTIFO43310 snosnR66.1-201ENST00000391095 99 ntBASIC3.38□□□□□ -1.87
CTIFO43310 RPL21P17-201ENST00000397467 475 ntBASIC3.38□□□□□ -1.87
CTIFO43310 RPS4XP7-201ENST00000406274 780 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AL354751.2-201ENST00000415471 210 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.38□□□□□ -1.87
CTIFO43310 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.38□□□□□ -1.87
CTIFO43310 HSPE1P1-201ENST00000421494 318 ntBASIC3.38□□□□□ -1.87
CTIFO43310 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.38□□□□□ -1.87
CTIFO43310 PPP1R2P5-201ENST00000457256 603 ntBASIC3.38□□□□□ -1.87
CTIFO43310 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.38□□□□□ -1.87
CTIFO43310 SNORA59A-201ENST00000459326 152 ntBASIC3.38□□□□□ -1.87
CTIFO43310 DYNLL1P5-201ENST00000467158 270 ntBASIC3.38□□□□□ -1.87
CTIFO43310 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.38□□□□□ -1.87
CTIFO43310 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.38□□□□□ -1.87
CTIFO43310 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.38□□□□□ -1.87
CTIFO43310 AC008716.1-201ENST00000511084 513 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.38□□□□□ -1.87
CTIFO43310 SNORA74D-201ENST00000516404 141 ntBASIC3.38□□□□□ -1.87
CTIFO43310 Y_RNA.691-201ENST00000516611 103 ntBASIC3.38□□□□□ -1.87
CTIFO43310 RN7SKP256-201ENST00000517201 314 ntBASIC3.38□□□□□ -1.87
CTIFO43310 SNORA70.24-201ENST00000517233 118 ntBASIC3.38□□□□□ -1.87
CTIFO43310 SNORA31.26-201ENST00000517250 137 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.38□□□□□ -1.87
CTIFO43310 AP000763.2-201ENST00000540641 163 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.38□□□□□ -1.87
CTIFO43310 MTCO3P23-201ENST00000561363 289 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.38□□□□□ -1.87
CTIFO43310 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.38□□□□□ -1.87
CTIFO43310 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTIFO43310 AC103705.1-201ENST00000619013 241 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AL160413.1-201ENST00000622780 310 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AC099506.2-201ENST00000623074 221 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.38□□□□□ -1.87
CTIFO43310 AL034408.1-202ENST00000636088 415 ntBASIC3.38□□□□□ -1.87
CTIFO43310 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
CTIFO43310 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTIFO43310 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CTIFO43310 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTIFO43310 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTIFO43310 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.37□□□□□ -1.87
CTIFO43310 RNU6-217P-201ENST00000384164 104 ntBASIC3.37□□□□□ -1.87
CTIFO43310 RNU6-1179P-201ENST00000384667 107 ntBASIC3.37□□□□□ -1.87
CTIFO43310 RPS4XP3-201ENST00000398541 413 ntBASIC3.37□□□□□ -1.87
CTIFO43310 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.37□□□□□ -1.87
CTIFO43310 RPL7P10-201ENST00000417407 739 ntBASIC3.37□□□□□ -1.87
CTIFO43310 USP9YP20-201ENST00000419224 558 ntBASIC3.37□□□□□ -1.87
CTIFO43310 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.37□□□□□ -1.87
CTIFO43310 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.37□□□□□ -1.87
CTIFO43310 AC091286.1-201ENST00000431233 461 ntBASIC3.37□□□□□ -1.87
CTIFO43310 AC073063.1-201ENST00000434352 607 ntBASIC3.37□□□□□ -1.87
CTIFO43310 SNRPEP4-201ENST00000435815 279 ntBASIC3.37□□□□□ -1.87
CTIFO43310 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.37□□□□□ -1.87
CTIFO43310 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.37□□□□□ -1.87
CTIFO43310 AL360271.2-201ENST00000447710 161 ntBASIC3.37□□□□□ -1.87
CTIFO43310 RNU7-66P-201ENST00000459469 62 ntBASIC3.37□□□□□ -1.87
CTIFO43310 MTND4P17-201ENST00000470444 350 ntBASIC3.37□□□□□ -1.87
CTIFO43310 SNORA19.2-201ENST00000516013 114 ntBASIC3.37□□□□□ -1.87
CTIFO43310 SCARNA15.1-201ENST00000516384 125 ntBASIC3.37□□□□□ -1.87
CTIFO43310 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.37□□□□□ -1.87
CTIFO43310 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.37□□□□□ -1.87
CTIFO43310 AC090115.3-201ENST00000553218 849 ntBASIC3.37□□□□□ -1.87
CTIFO43310 BNIP3P25-201ENST00000596023 559 ntBASIC3.37□□□□□ -1.87
CTIFO43310 ATP1B3P1-201ENST00000605365 821 ntBASIC3.37□□□□□ -1.87
CTIFO43310 AC104237.2-201ENST00000612456 443 ntBASIC3.37□□□□□ -1.87
CTIFO43310 AC002076.2-201ENST00000617362 122 ntBASIC3.37□□□□□ -1.87
CTIFO43310 MIR6076-201ENST00000617521 113 ntBASIC3.37□□□□□ -1.87
CTIFO43310 AC009093.8-201ENST00000641769 292 ntBASIC3.37□□□□□ -1.87
CTIFO43310 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CTIFO43310 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CTIFO43310 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTIFO43310 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTIFO43310 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CTIFO43310 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.36□□□□□ -1.87
CTIFO43310 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CTIFO43310 FTLP6-201ENST00000355274 422 ntBASIC3.36□□□□□ -1.87
CTIFO43310 Y_RNA.111-201ENST00000363248 100 ntBASIC3.36□□□□□ -1.87
CTIFO43310 EIF4E2P1-201ENST00000393781 255 ntBASIC3.36□□□□□ -1.87
CTIFO43310 AP000567.1-201ENST00000406413 156 ntBASIC3.36□□□□□ -1.87
CTIFO43310 AL451074.5-201ENST00000415894 435 ntBASIC3.36□□□□□ -1.87
CTIFO43310 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.36□□□□□ -1.87
CTIFO43310 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.36□□□□□ -1.87
CTIFO43310 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.36□□□□□ -1.87
CTIFO43310 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.36□□□□□ -1.87
CTIFO43310 HMGB1P30-201ENST00000492455 606 ntBASIC3.36□□□□□ -1.87
CTIFO43310 AC022493.1-201ENST00000492984 337 ntBASIC3.36□□□□□ -1.87
CTIFO43310 AC079140.5-201ENST00000507882 310 ntBASIC3.36□□□□□ -1.87
CTIFO43310 HMGN1P11-201ENST00000508668 303 ntBASIC3.36□□□□□ -1.87
CTIFO43310 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.36□□□□□ -1.87
CTIFO43310 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.36□□□□□ -1.87
CTIFO43310 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms