Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL139276.1-201ENST00000311910 1001 ntBASIC2.19□□□□□ -2.06
MSH4O15457 AC073343.1-201ENST00000328239 651 ntBASIC2.19□□□□□ -2.06
MSH4O15457 RNU5E-1-201ENST00000362477 120 ntBASIC2.19□□□□□ -2.06
MSH4O15457 RNU6-1280P-201ENST00000365211 107 ntBASIC2.19□□□□□ -2.06
MSH4O15457 RNU6-898P-201ENST00000365627 104 ntBASIC2.19□□□□□ -2.06
MSH4O15457 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.19□□□□□ -2.06
MSH4O15457 AL031577.2-201ENST00000404133 280 ntBASIC2.19□□□□□ -2.06
MSH4O15457 ELOCP4-201ENST00000420090 333 ntBASIC2.19□□□□□ -2.06
MSH4O15457 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH4O15457 WARS2P1-201ENST00000429678 537 ntBASIC2.19□□□□□ -2.06
MSH4O15457 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.19□□□□□ -2.06
MSH4O15457 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.19□□□□□ -2.06
MSH4O15457 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
MSH4O15457 HMGB3P3-201ENST00000510526 400 ntBASIC2.19□□□□□ -2.06
MSH4O15457 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
MSH4O15457 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
MSH4O15457 AC106038.2-201ENST00000520706 568 ntBASIC2.19□□□□□ -2.06
MSH4O15457 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.19□□□□□ -2.06
MSH4O15457 OR5B19P-201ENST00000531766 928 ntBASIC2.19□□□□□ -2.06
MSH4O15457 AC010186.2-204ENST00000537668 439 ntBASIC2.19□□□□□ -2.06
MSH4O15457 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.19□□□□□ -2.06
MSH4O15457 AL157871.3-201ENST00000557231 293 ntBASIC2.19□□□□□ -2.06
MSH4O15457 LINC00933-203ENST00000559812 219 ntBASIC2.19□□□□□ -2.06
MSH4O15457 RPS3AP23-202ENST00000574601 686 ntBASIC2.19□□□□□ -2.06
MSH4O15457 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.19□□□□□ -2.06
MSH4O15457 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH4O15457 NRBF2P1-201ENST00000587407 859 ntBASIC2.19□□□□□ -2.06
MSH4O15457 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
MSH4O15457 MIR6895-201ENST00000613497 78 ntBASIC2.19□□□□□ -2.06
MSH4O15457 AC099654.13-201ENST00000639774 207 ntBASIC2.19□□□□□ -2.06
MSH4O15457 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.19□□□□□ -2.06
MSH4O15457 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
MSH4O15457 CDC27P3-201ENST00000635418 1910 ntBASIC2.19□□□□□ -2.06
MSH4O15457 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
MSH4O15457 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.18□□□□□ -2.06
MSH4O15457 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
MSH4O15457 Y_RNA.33-201ENST00000362591 102 ntBASIC2.18□□□□□ -2.06
MSH4O15457 RNU6-39P-201ENST00000384344 107 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AL109913.1-201ENST00000421173 514 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.18□□□□□ -2.06
MSH4O15457 TOMM20P4-201ENST00000427861 435 ntBASIC2.18□□□□□ -2.06
MSH4O15457 RPL30P4-201ENST00000429309 333 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.18□□□□□ -2.06
MSH4O15457 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH4O15457 AC004383.1-201ENST00000438135 289 ntBASIC2.18□□□□□ -2.06
MSH4O15457 USP9YP15-201ENST00000442391 422 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AL078601.1-201ENST00000444542 271 ntBASIC2.18□□□□□ -2.06
MSH4O15457 BTF3P15-201ENST00000455606 336 ntBASIC2.18□□□□□ -2.06
MSH4O15457 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH4O15457 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.18□□□□□ -2.06
MSH4O15457 AC023194.1-201ENST00000493084 308 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AC116655.1-201ENST00000508324 901 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH4O15457 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH4O15457 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH4O15457 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH4O15457 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH4O15457 Y_RNA.672-201ENST00000516289 104 ntBASIC2.18□□□□□ -2.06
MSH4O15457 IGLV3-17-201ENST00000519099 244 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.18□□□□□ -2.06
MSH4O15457 RPL21P5-201ENST00000554662 472 ntBASIC2.18□□□□□ -2.06
MSH4O15457 MIR1273C-201ENST00000578669 77 ntBASIC2.18□□□□□ -2.06
MSH4O15457 MIR548AB-201ENST00000584917 84 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AC244517.12-201ENST00000623581 663 ntBASIC2.18□□□□□ -2.06
MSH4O15457 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.18□□□□□ -2.06
MSH4O15457 AL359854.1-201ENST00000614203 1594 ntBASIC2.18□□□□□ -2.06
MSH4O15457 AL109809.4-201ENST00000603520 2185 ntBASIC2.17□□□□□ -2.06
MSH4O15457 Z82209.1-201ENST00000422141 2135 ntBASIC2.17□□□□□ -2.06
MSH4O15457 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MSH4O15457 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
MSH4O15457 OR56A5-201ENST00000340110 738 ntBASIC2.17□□□□□ -2.06
MSH4O15457 MIR764-201ENST00000390811 85 ntBASIC2.17□□□□□ -2.06
MSH4O15457 U8.13-201ENST00000390842 128 ntBASIC2.17□□□□□ -2.06
MSH4O15457 SNORA40C-201ENST00000391285 128 ntBASIC2.17□□□□□ -2.06
MSH4O15457 RNU2-20P-201ENST00000410425 191 ntBASIC2.17□□□□□ -2.06
MSH4O15457 Y_RNA.598-201ENST00000410480 95 ntBASIC2.17□□□□□ -2.06
MSH4O15457 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
MSH4O15457 RNU4-72P-201ENST00000410754 173 ntBASIC2.17□□□□□ -2.06
MSH4O15457 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH4O15457 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH4O15457 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.17□□□□□ -2.06
MSH4O15457 AL365203.2-201ENST00000423444 196 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH4O15457 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH4O15457 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MSH4O15457 AL133217.1-201ENST00000450980 425 ntBASIC2.17□□□□□ -2.06
MSH4O15457 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH4O15457 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.17□□□□□ -2.06
MSH4O15457 AL441985.1-201ENST00000457727 251 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH4O15457 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
MSH4O15457 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.17□□□□□ -2.06
MSH4O15457 FAM92A1P2-202ENST00000504766 877 ntBASIC2.17□□□□□ -2.06
MSH4O15457 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.17□□□□□ -2.06
MSH4O15457 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.17□□□□□ -2.06
MSH4O15457 FABP5P5-201ENST00000515537 406 ntBASIC2.17□□□□□ -2.06
MSH4O15457 ACA59.2-201ENST00000517061 156 ntBASIC2.17□□□□□ -2.06
MSH4O15457 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.17□□□□□ -2.06
MSH4O15457 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms