Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MIR10A-201ENST00000385043 110 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 MIR147B-201ENST00000390185 80 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 RPS4XP8-201ENST00000402039 771 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AL138827.1-201ENST00000402666 306 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 RNU2-16P-201ENST00000410712 136 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 PTGES3P4-201ENST00000426243 356 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 MTCO2P19-201ENST00000427513 598 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AC010975.2-201ENST00000427781 588 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 ARL5AP4-201ENST00000430731 512 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AL118520.1-201ENST00000450770 291 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AL121769.1-201ENST00000469473 401 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 HMGB1P29-201ENST00000505659 499 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AC008716.1-201ENST00000511084 513 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 RNU5F-8P-201ENST00000515941 111 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 SNORA31.6-201ENST00000516241 130 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 RNU6-1178P-201ENST00000516674 107 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 COX6CP5-201ENST00000527162 228 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AC027807.1-201ENST00000559921 996 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AGGF1P4-201ENST00000568249 801 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 MTCYBP33-201ENST00000575007 1130 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 MIR4703-201ENST00000577728 79 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 AC004223.2-201ENST00000590309 544 ntBASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.51□□□□□ -2.01
NPIPA3F8WFD2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AC092593.1-201ENST00000515413 1815 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 OR4G2P-201ENST00000328113 903 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 MIR26A1-201ENST00000362205 77 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 PGBD4P6-201ENST00000421501 610 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AL627311.1-201ENST00000431514 115 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 RPS15AP7-201ENST00000439294 405 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AC107626.1-201ENST00000471084 183 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 MTND3P25-201ENST00000509243 135 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 SNORA9.3-201ENST00000516383 129 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 ACA59.2-201ENST00000517061 156 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AC008752.3-201ENST00000588113 712 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AC087045.1-201ENST00000605856 382 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AL158209.2-201ENST00000619266 216 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 OR5AK4P-201ENST00000635912 903 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.5□□□□□ -2.01
NPIPA3F8WFD2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 RNU6-715P-201ENST00000365204 103 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 RNU1-100P-201ENST00000365255 165 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 SET-203ENST00000372688 801 ntTSL 2 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 Y_RNA.409-201ENST00000383990 98 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 MIR627-201ENST00000384979 97 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AL360182.1-201ENST00000397433 468 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 MTCO3P41-201ENST00000414801 328 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AL353193.1-201ENST00000421444 268 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 MTCO2P7-201ENST00000446518 666 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 SCARNA11.3-201ENST00000517276 130 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 BTF3P12-201ENST00000519620 469 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 OR5BN1P-201ENST00000532955 829 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC135279.1-201ENST00000543493 504 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC234778.2-201ENST00000566241 354 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 MTATP6P3-201ENST00000581686 676 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 MIR3605-201ENST00000583214 100 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC073539.2-201ENST00000597113 165 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC012507.3-201ENST00000603556 477 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AL136363.2-201ENST00000604173 851 ntBASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.49□□□□□ -2.01
NPIPA3F8WFD2 AC069234.5-201ENST00000611056 416 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms