Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC009974.1-201ENST00000608881 455 ntBASIC0.57□□□□□ -2.32
RGPD3A6NKT7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
RGPD3A6NKT7 RNU6-26P-201ENST00000383985 107 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 MIR515-2-201ENST00000384883 83 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 MIR515-1-201ENST00000384884 83 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 MIR29C-201ENST00000385231 88 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 BTF3P8-201ENST00000414577 526 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 RPL36P19-201ENST00000430744 301 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.56□□□□□ -2.32
RGPD3A6NKT7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.56□□□□□ -2.32
RGPD3A6NKT7 RPL26P9-201ENST00000457466 433 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 RNA5SP285-201ENST00000516619 119 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 AP003122.4-201ENST00000530980 758 ntBASIC0.56□□□□□ -2.32
RGPD3A6NKT7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.56□□□□□ -2.32
RGPD3A6NKT7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.56□□□□□ -2.32
RGPD3A6NKT7 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.56□□□□□ -2.32
RGPD3A6NKT7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 MIR329-2-201ENST00000385029 84 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AL139098.1-201ENST00000407291 389 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 RNA5SP25-201ENST00000410815 110 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 PIGPP2-201ENST00000411569 458 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 SNRPGP17-201ENST00000603780 214 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AP000654.2-201ENST00000605633 586 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AC024581.2-201ENST00000619986 252 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 RNU6-271P-201ENST00000363858 105 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 MIR608-201ENST00000384820 100 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 MIR100-201ENST00000385259 80 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 UBE2V2P3-201ENST00000433562 437 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 RAC1P7-201ENST00000445367 377 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 FCF1P6-201ENST00000456841 595 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AC134050.1-201ENST00000495088 933 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 MIR4661-201ENST00000582720 75 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 HMGN1P30-201ENST00000589286 268 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AL359314.1-201ENST00000616913 261 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AC090772.4-201ENST00000623599 362 ntBASIC0.55□□□□□ -2.32
RGPD3A6NKT7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.55□□□□□ -2.32
RGPD3A6NKT7 RNU1-23P-201ENST00000363361 144 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.54□□□□□ -2.32
RGPD3A6NKT7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
RGPD3A6NKT7 SNORA29-201ENST00000384183 140 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 MIR32-201ENST00000384965 70 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 LINC01347-201ENST00000417964 355 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 MTCO2P20-201ENST00000437339 673 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 GTF2IP12-201ENST00000456547 356 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 SNORA4.4-201ENST00000515921 135 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 AC233702.2-202ENST00000562547 291 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
RGPD3A6NKT7 AL355472.4-201ENST00000610233 626 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 AC018926.3-201ENST00000618841 406 ntBASIC0.54□□□□□ -2.32
RGPD3A6NKT7 AC009518.2-201ENST00000418056 731 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 NCOR1P3-201ENST00000420479 303 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 USP9YP24-201ENST00000434374 697 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.53□□□□□ -2.32
RGPD3A6NKT7 CR769776.1-201ENST00000441254 787 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.53□□□□□ -2.32
RGPD3A6NKT7 VPS26AP1-201ENST00000483197 979 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 BOLA3P3-201ENST00000505182 232 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 RNU7-40P-201ENST00000516397 64 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 AC015688.2-201ENST00000584523 262 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 AC080013.4-201ENST00000607624 649 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 AL589743.7-201ENST00000612637 233 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 AC073968.1-201ENST00000618594 637 ntBASIC0.53□□□□□ -2.32
RGPD3A6NKT7 RNU6-167P-201ENST00000384292 106 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.52□□□□□ -2.33
RGPD3A6NKT7 AL512637.2-201ENST00000431287 1256 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 MTCO3P5-201ENST00000433620 714 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 PRPS1P1-201ENST00000445305 876 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 DDX3P2-201ENST00000446138 111 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 C1DP5-201ENST00000525775 383 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 EIF4A1P12-201ENST00000551910 141 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 ADAM3B-201ENST00000569937 840 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.52□□□□□ -2.33
RGPD3A6NKT7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.52□□□□□ -2.33
RGPD3A6NKT7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.52□□□□□ -2.33
RGPD3A6NKT7 snoU13.9-201ENST00000458927 103 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 PSMC1P5-201ENST00000512850 177 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 SNORA48.9-201ENST00000516419 162 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 AC136628.3-201ENST00000521868 290 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.52□□□□□ -2.33
RGPD3A6NKT7 AC019288.1-201ENST00000557918 224 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 AL391813.1-201ENST00000603098 260 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 MIR6718-201ENST00000616153 80 ntBASIC0.52□□□□□ -2.33
RGPD3A6NKT7 MIR888-201ENST00000401186 77 ntBASIC0.51□□□□□ -2.33
RGPD3A6NKT7 ZNF863P-201ENST00000426746 417 ntBASIC0.51□□□□□ -2.33
RGPD3A6NKT7 AC091435.1-201ENST00000505442 584 ntBASIC0.51□□□□□ -2.33
RGPD3A6NKT7 AC067904.2-201ENST00000517322 1283 ntBASIC0.51□□□□□ -2.33
RGPD3A6NKT7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms