Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 AC093752.1-206ENST00000511823 336 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 RNU6-667P-201ENST00000517186 102 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 AC090821.2-201ENST00000523552 176 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 AC023538.1-201ENST00000534576 736 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 PSMA3P-201ENST00000555485 635 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 AL731537.2-201ENST00000561565 951 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 MIR3660-201ENST00000584845 100 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 AP001542.1-201ENST00000591314 200 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 AC097468.3-201ENST00000607956 456 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 AC008121.3-201ENST00000618726 433 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 AC017037.3-201ENST00000625016 472 ntBASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
TCRBV4S1A1TA0A5B7 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNU6-512P-201ENST00000364438 103 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MIR597-201ENST00000384968 97 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 BTF3L4P2-201ENST00000392798 346 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AL079342.2-201ENST00000403367 482 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MIR1262-201ENST00000408276 93 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 GTF2IP3-201ENST00000433887 494 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MTND1P31-201ENST00000449206 961 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 HMGN2P18-201ENST00000450680 270 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RPS29P29-201ENST00000456396 171 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNA5SP57-201ENST00000459463 123 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC010631.1-201ENST00000474150 156 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RPL7P43-201ENST00000478876 753 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AF131216.2-201ENST00000512316 564 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 Y_RNA.673-201ENST00000516306 88 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNU6-362P-201ENST00000516736 90 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MTCO3P15-201ENST00000526563 574 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC079148.1-201ENST00000565944 819 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC023825.1-201ENST00000566704 1030 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AL445435.1-201ENST00000604232 665 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC021646.1-201ENST00000605469 484 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MIR6134-201ENST00000617606 109 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC013470.4-201ENST00000619978 986 ntBASIC0.96□□□□□ -2.26
TCRBV4S1A1TA0A5B7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNU6-53P-201ENST00000365367 106 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNU6-1122P-201ENST00000384449 107 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MIR1276-201ENST00000408707 83 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNA5SP501-201ENST00000410990 112 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RPL30P13-201ENST00000418873 348 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 UBE2V1P4-201ENST00000425374 344 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MTND4P6-201ENST00000438297 472 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RPL18AP17-201ENST00000455326 198 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC093852.1-201ENST00000503587 266 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC116655.1-201ENST00000508324 901 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC093809.1-201ENST00000509155 340 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MTCYBP16-201ENST00000509187 1129 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 FAM206BP-201ENST00000510179 541 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNA5SP102-201ENST00000516865 106 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RN7SKP258-201ENST00000517151 304 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AP004247.1-201ENST00000531556 1289 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC098483.2-201ENST00000603158 454 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AL050343.2-201ENST00000607338 280 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 AC034229.4-201ENST00000607861 441 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MIR6504-201ENST00000613520 61 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.95□□□□□ -2.26
TCRBV4S1A1TA0A5B7 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 Y_RNA.191-201ENST00000363972 113 ntBASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 Y_RNA.269-201ENST00000364685 89 ntBASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 Y_RNA.408-201ENST00000383987 102 ntBASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNU6-468P-201ENST00000384003 109 ntBASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MIR30A-201ENST00000385092 71 ntBASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 MIR29C-201ENST00000385231 88 ntBASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.94□□□□□ -2.26
TCRBV4S1A1TA0A5B7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms