Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 MTND2P20-201ENST00000440805 661 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AL078601.1-201ENST00000444542 271 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 MTND1P18-201ENST00000448191 573 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 snoU13.8-201ENST00000458890 104 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 RNU6-703P-201ENST00000516946 107 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 SNRPGP17-201ENST00000603780 214 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 ELOCP5-201ENST00000604924 333 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC026741.1-201ENST00000605892 482 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 MIR98-201ENST00000606724 119 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC010975.3-201ENST00000618727 978 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 SNORD114-27-201ENST00000363766 70 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 RNU6-516P-201ENST00000411381 104 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 SRIP3-201ENST00000413200 219 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 BX664727.1-201ENST00000416024 466 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AL449283.1-202ENST00000418249 604 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC097463.2-201ENST00000421074 142 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 RNU7-59P-201ENST00000459101 61 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 HIGD1AP17-201ENST00000554576 276 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 AC009974.1-201ENST00000608881 455 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 MIR1322-201ENST00000638013 71 ntBASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SCN10AQ9Y5Y9 RNU4-41P-201ENST00000364426 143 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 SKA2P1-201ENST00000425592 390 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 DPRXP1-201ENST00000426312 460 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 USP9YP24-201ENST00000434374 697 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 AL353706.1-201ENST00000436728 494 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 AL121601.2-201ENST00000438019 707 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 MTND2P29-201ENST00000438595 412 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 AC108729.2-201ENST00000476543 840 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 AC121161.1-201ENST00000510606 652 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 AC022861.1-201ENST00000522981 663 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 AC016957.1-201ENST00000534895 309 ntBASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SCN10AQ9Y5Y9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 RN7SKP265-201ENST00000516448 223 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 RNU2-44P-201ENST00000516795 194 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 SNORA44.1-201ENST00000517031 108 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AC123912.5-201ENST00000605470 343 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AP005229.2-201ENST00000609980 697 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AC120349.2-201ENST00000625002 298 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 MIR373-201ENST00000362273 69 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 MIR218-1-201ENST00000384999 110 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 MIR676-201ENST00000390702 67 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 MIR1283-2-201ENST00000408621 87 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AC009310.1-201ENST00000414414 451 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 CYCSP33-201ENST00000414485 327 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AP005597.4-201ENST00000526762 229 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AP001189.2-201ENST00000527320 189 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 SLC2A13P1-201ENST00000531560 322 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 ADAM3B-201ENST00000569937 840 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 MIR3167-201ENST00000579623 85 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 AL353997.4-201ENST00000586196 166 ntBASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
SCN10AQ9Y5Y9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 RNU2-32P-201ENST00000411193 191 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 PTGES3P1-201ENST00000439531 483 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 HMGN2P10-201ENST00000448085 265 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 CYP2C59P-201ENST00000457790 269 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 AC008379.1-201ENST00000463655 464 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 RNU6-714P-201ENST00000516963 103 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 DUXAP5-201ENST00000529668 529 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 AC091304.6-201ENST00000619761 202 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 AL445264.1-201ENST00000621719 171 ntBASIC1.22□□□□□ -2.21
SCN10AQ9Y5Y9 RNU4-38P-201ENST00000364472 129 ntBASIC1.21□□□□□ -2.22
SCN10AQ9Y5Y9 Y_RNA.295-201ENST00000364918 102 ntBASIC1.21□□□□□ -2.22
SCN10AQ9Y5Y9 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
SCN10AQ9Y5Y9 SNORA18.2-201ENST00000383865 132 ntBASIC1.21□□□□□ -2.22
SCN10AQ9Y5Y9 MIR518A2-201ENST00000384966 87 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms