Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 MIR490-201ENST00000384865 128 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 AL138878.1-201ENST00000405131 347 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-293P-201ENST00000411259 106 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 AL592148.1-201ENST00000413568 445 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 MTATP6P7-201ENST00000453315 681 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 BX510359.1-201ENST00000456973 237 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 SNORA59A-201ENST00000459326 152 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 AC130509.1-201ENST00000464158 433 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-703P-201ENST00000516946 107 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 MIR3171-201ENST00000584270 74 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 AP000787.2-201ENST00000604432 568 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 RNU1-30P-201ENST00000606575 163 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 U6.99-201ENST00000637524 83 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 AL732372.2-225ENST00000642124 456 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 AC006504.1-201ENST00000562493 3666 ntBASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PCDHB1Q9Y5F3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AC138393.1-203ENST00000327086 343 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 SNORD14B-201ENST00000364533 90 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-384P-201ENST00000364900 104 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-43P-201ENST00000384302 107 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-1106P-201ENST00000390845 107 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 RPS4XP3-201ENST00000398541 413 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 MIR888-201ENST00000401186 77 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AL096701.2-201ENST00000416920 238 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AC006989.1-201ENST00000427212 131 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 NDUFB1P1-201ENST00000435191 180 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 RPS3AP46-201ENST00000448352 682 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 HMGB3P8-201ENST00000449709 577 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 RPL12P25-201ENST00000455592 494 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AC092798.1-201ENST00000458542 409 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 SNRPGP3-201ENST00000469405 227 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 HMGB3P15-201ENST00000507326 574 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AC011602.1-201ENST00000546484 331 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 MIR4782-201ENST00000577987 79 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 MIR3609-201ENST00000582661 80 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 MIR5690-201ENST00000583739 73 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AC005000.2-201ENST00000605468 310 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AC040896.1-201ENST00000613819 479 ntBASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.64□□□□□ -1.83
PCDHB1Q9Y5F3 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 SNORD3E-201ENST00000362899 217 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-1329P-201ENST00000365664 107 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 RNU6-166P-201ENST00000384371 107 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 MIR10A-201ENST00000385043 110 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 HMGN2P30-201ENST00000423237 256 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 SKA2P1-201ENST00000425592 390 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 RPL21P23-201ENST00000446654 460 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC005741.1-201ENST00000511094 432 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC092436.3-201ENST00000511788 257 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 RNU1-54P-201ENST00000517181 120 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC007458.1-201ENST00000542812 373 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC008011.1-201ENST00000545989 227 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AMZ2P1-203ENST00000565833 850 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC084781.2-201ENST00000615568 161 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC002076.2-201ENST00000617362 122 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 AC090971.5-201ENST00000621102 293 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 MIR3651-201ENST00000630427 90 ntBASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PCDHB1Q9Y5F3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms