Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 HMGN2P30-201ENST00000423237 256 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC007560.1-201ENST00000426912 237 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 AL365400.1-201ENST00000431854 640 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 BRK1P2-201ENST00000442875 223 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 AL583843.1-201ENST00000456070 346 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 TRBVA-201ENST00000498804 316 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 RNU6-572P-201ENST00000516724 80 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC005668.1-201ENST00000571142 476 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 MIR4742-201ENST00000581069 85 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC091135.1-201ENST00000585943 307 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC005498.1-201ENST00000592125 465 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 HSPE1P7-201ENST00000604681 321 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC002044.1-201ENST00000606707 158 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AL121757.2-201ENST00000611223 313 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 uc_338.5-201ENST00000611839 155 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC005858.4-201ENST00000623191 700 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC099654.5-201ENST00000636479 350 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 ZNF826P-207ENST00000622273 1910 ntBASIC3.18□□□□□ -1.9
PKP3Q9Y446 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
PKP3Q9Y446 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PKP3Q9Y446 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKP3Q9Y446 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 MIR148B-201ENST00000362252 99 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 SNORD81.2-201ENST00000365153 76 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 RNU6-1013P-201ENST00000384180 107 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 SNORA40C-201ENST00000391285 128 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 MIR888-201ENST00000401186 77 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 PDCL2P1-201ENST00000419302 352 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 AC098614.2-201ENST00000426040 255 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 MTND4LP16-201ENST00000440828 295 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 AC093019.1-201ENST00000443135 252 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 AL078601.1-201ENST00000444542 271 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 RNU6-329P-201ENST00000459618 107 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 RN7SL863P-201ENST00000462370 296 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 SLC25A15P5-201ENST00000508033 253 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 RNU1-86P-201ENST00000516108 154 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 MIR892C-201ENST00000516410 77 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 RNU1-107P-201ENST00000516617 154 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 RNU7-30P-201ENST00000516835 62 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 SCOCP1-201ENST00000554676 349 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.17□□□□□ -1.9
PKP3Q9Y446 AC005261.5-201ENST00000596280 355 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 AC021646.1-201ENST00000605469 484 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 LARP7P1-201ENST00000605576 316 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 RMST_4.1-201ENST00000616886 107 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 U6.99-201ENST00000637524 83 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 SRP72P2-201ENST00000344851 1979 ntBASIC3.17□□□□□ -1.9
PKP3Q9Y446 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PKP3Q9Y446 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKP3Q9Y446 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKP3Q9Y446 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKP3Q9Y446 RNU6-1252P-201ENST00000363054 104 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 Y_RNA.142-201ENST00000363491 102 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 RNU6-884P-201ENST00000363889 107 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 RNU6-270P-201ENST00000364131 105 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 RNU2-41P-201ENST00000410991 178 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 Y_RNA.623-201ENST00000411128 95 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 RPL26P27-201ENST00000414397 437 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC099548.1-201ENST00000421443 426 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 RPL37P4-201ENST00000448908 268 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 NDUFB1P2-201ENST00000449477 176 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 PPP1R2P5-201ENST00000457256 603 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC087884.1-201ENST00000469738 328 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC117503.1-201ENST00000472241 394 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 HMGN2P13-201ENST00000476476 274 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC011005.2-201ENST00000487324 359 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 PHBP14-201ENST00000512887 367 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 RNU6-864P-201ENST00000516256 108 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 RNU1-103P-201ENST00000516502 125 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 RNU6-1069P-201ENST00000516612 133 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 SCARNA20.6-201ENST00000517251 106 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 AC069113.1-201ENST00000517763 267 ntBASIC3.16□□□□□ -1.9
PKP3Q9Y446 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PKP3Q9Y446 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.16□□□□□ -1.9
PKP3Q9Y446 H3F3AP1-201ENST00000559984 334 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms