Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AC092608.2-201ENST00000624427 218 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 AP001002.2-201ENST00000625137 386 ntBASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
CHTOPQ9Y3Y2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-723P-201ENST00000383973 107 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 SNORA48.1-201ENST00000390879 135 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AL360182.1-201ENST00000397433 468 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 ERHP2-201ENST00000402323 299 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 RNU2-23P-201ENST00000410545 195 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AL590556.1-201ENST00000423231 483 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 EEF1A1P39-201ENST00000440791 250 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AL135938.1-201ENST00000443141 297 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AL357134.1-201ENST00000445848 426 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 RPL7P18-201ENST00000478965 734 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AC132942.1-201ENST00000486753 483 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 RNA5SP24-201ENST00000516478 95 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 SCARNA16.3-201ENST00000516595 184 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 CR383656.8-201ENST00000549046 145 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 MTCYBP33-201ENST00000575007 1130 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 BNIP3P22-201ENST00000593399 556 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 MIR8074-201ENST00000615081 81 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 AL137790.1-201ENST00000634283 177 ntBASIC1.56□□□□□ -2.16
CHTOPQ9Y3Y2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 MIR412-201ENST00000362142 91 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 RNY4P24-201ENST00000362735 96 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-23P-201ENST00000363283 107 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 SMIM11P1-201ENST00000369586 178 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 SNORA44-201ENST00000384584 132 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 SNORA40.4-201ENST00000390971 128 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 RNU2-36P-201ENST00000410361 191 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 RN7SKP51-201ENST00000410781 304 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 Y_RNA.623-201ENST00000411128 95 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AL445669.1-201ENST00000426743 755 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 LARP1BP3-201ENST00000437229 869 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 SDR42E1P3-201ENST00000438345 502 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 RSL24D1P3-201ENST00000449255 495 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 FDX1P2-201ENST00000450769 375 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 RNA5SP320-201ENST00000516263 124 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC021269.2-201ENST00000532318 330 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC025678.1-201ENST00000567861 338 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 MIR544B-201ENST00000582372 78 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 MIR4325-201ENST00000583049 90 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC010900.2-201ENST00000604508 210 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC130454.1-201ENST00000622948 401 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 AC007792.1-201ENST00000623023 402 ntBASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.55□□□□□ -2.16
CHTOPQ9Y3Y2 SNORA4.1-201ENST00000364263 144 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 RNY3P13-201ENST00000365542 102 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-622P-201ENST00000384272 103 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-769P-201ENST00000384407 104 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-160P-201ENST00000384591 107 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 SNORA67.4-201ENST00000384688 142 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC005005.2-201ENST00000420779 380 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 TXNL1P1-201ENST00000429528 554 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 TPT1P8-201ENST00000510120 555 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC025465.3-201ENST00000510570 311 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 RNU6-1092P-201ENST00000516955 87 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 RPL7P20-201ENST00000520308 745 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC087276.1-201ENST00000529659 480 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC013828.2-201ENST00000532487 235 ntBASIC1.54□□□□□ -2.16
CHTOPQ9Y3Y2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms