Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC009961.2-201ENST00000435771 251 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC104850.1-201ENST00000435940 476 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 IFNA11P-201ENST00000446352 526 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AL033528.1-201ENST00000453780 140 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 snoU109.1-201ENST00000459339 135 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC025033.1-201ENST00000463883 194 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 TRBV1-201ENST00000476502 284 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC105252.1-201ENST00000503089 286 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 RNU6-914P-201ENST00000516749 109 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 RNU6-143P-201ENST00000516942 93 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 RNU6-1315P-201ENST00000517187 99 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 SCARNA11.3-201ENST00000517276 130 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC021739.1-201ENST00000559631 174 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC026464.5-201ENST00000562497 722 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 MIR3682-201ENST00000581338 84 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 MIR5002-201ENST00000584713 97 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC005771.1-201ENST00000585581 349 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC011939.3-201ENST00000613686 466 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC008250.2-201ENST00000615261 205 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AP001506.1-201ENST00000615444 211 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AL590808.1-201ENST00000618696 141 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 PISRT1-201ENST00000626175 531 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AL512643.1-201ENST00000635735 524 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 AC010889.1-201ENST00000566193 2666 ntBASIC2□□□□□ -2.09
TRAPPC4Q9Y296 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 MTND4P35-201ENST00000604257 1375 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC006020.1-201ENST00000420179 1854 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 U3.4-201ENST00000363352 213 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 XGY1-201ENST00000381172 446 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 SNORA20.2-201ENST00000383922 131 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 RNU6-658P-201ENST00000384606 106 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 MIR301A-201ENST00000385261 86 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 SNORA40.3-201ENST00000390964 122 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 BTF3P7-201ENST00000407097 488 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 MYL8P-204ENST00000431574 518 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 RPL23AP7-203ENST00000449021 469 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC093899.1-201ENST00000457984 376 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 SNORD19.2-201ENST00000516978 73 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 RNU6-1183P-201ENST00000517054 60 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 RNU6-1220P-201ENST00000517126 108 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC006199.1-201ENST00000548728 219 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC009127.3-201ENST00000570531 403 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC024619.4-201ENST00000580924 316 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 MIR4435-1-201ENST00000582552 80 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AC025811.1-201ENST00000604312 472 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 APOOP1-201ENST00000604695 592 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 MIR15A-201ENST00000607334 83 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 MIR3199-2-201ENST00000636243 86 ntBASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAPPC4Q9Y296 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 FARSBP1-201ENST00000435808 1778 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 RNU1-91P-201ENST00000364746 163 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 RNU6-169P-201ENST00000365336 107 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 SNORA4.3-201ENST00000365564 137 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 Z98749.2-208ENST00000381646 500 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 MTND3P17-201ENST00000416968 344 ntBASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAPPC4Q9Y296 RPL23AP30-201ENST00000432419 501 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms