Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AC010733.2-201ENST00000589496 5702 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 DEFB108F-201ENST00000344638 222 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 RNU6-1301P-201ENST00000362724 104 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 RNU6-173P-201ENST00000364215 104 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 RNU1-132P-201ENST00000364300 164 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AL358453.1-201ENST00000422522 250 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 TOMM20P4-201ENST00000427861 435 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 TOMM22P6-201ENST00000465035 409 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 RN7SL303P-201ENST00000469773 251 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 RNU7-175P-201ENST00000515915 61 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 RNU6-1256P-201ENST00000516539 103 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 SNORA31.19-201ENST00000517079 126 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AC011476.5-201ENST00000615594 130 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
AP4E1Q9UPM8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 Y_RNA.245-201ENST00000364493 95 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 Y_RNA.291-201ENST00000364886 113 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 RNU6-336P-201ENST00000364891 107 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 Z82188.1-201ENST00000436709 154 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AC006463.2-201ENST00000473326 348 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AL160314.1-201ENST00000490836 438 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AC006499.6-201ENST00000511169 607 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AC010265.1-201ENST00000513509 211 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 IFITM8P-201ENST00000522529 394 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 TVP23BP1-201ENST00000557500 617 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 MIR4659A-201ENST00000580269 81 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 AC011944.2-201ENST00000624440 683 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 MIR7641-1-201ENST00000627518 61 ntBASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
AP4E1Q9UPM8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 MIR708-201ENST00000390708 88 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 RPL18P10-201ENST00000425606 538 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 RPL21P40-201ENST00000428586 483 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 OR4C10P-201ENST00000434991 931 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 PIGFP3-201ENST00000441918 722 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 AC087441.2-201ENST00000529141 262 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 MIR432-201ENST00000606207 94 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 AC114781.5-201ENST00000615297 108 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 AC097372.5-201ENST00000623665 376 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 U4.7-201ENST00000638126 106 ntBASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.37□□□□□ -1.71
AP4E1Q9UPM8 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 AC068254.2-201ENST00000623938 3577 ntBASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 RNU6-222P-201ENST00000362438 107 ntBASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 RNA5SP366-201ENST00000365454 123 ntBASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 SNORA56-201ENST00000383966 129 ntBASIC4.36□□□□□ -1.71
AP4E1Q9UPM8 MIR34A-201ENST00000385130 110 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms