Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL353621.1-201ENST00000418219 243 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 HMGN2P3-201ENST00000433603 273 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 HMGN2P5-201ENST00000436882 273 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC016691.1-201ENST00000441321 413 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 PSPHP1-201ENST00000450062 261 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 SSXP1-201ENST00000453640 473 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 SNORD11.1-201ENST00000459482 85 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC011005.2-201ENST00000487324 359 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC109927.2-201ENST00000506416 303 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AL157871.3-201ENST00000557231 293 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC068276.1-201ENST00000605793 379 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC130324.3-201ENST00000614165 542 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC009233.1-201ENST00000616477 371 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 YWHAEP7-203ENST00000622054 312 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AP003400.5-201ENST00000624827 617 ntBASIC2.12□□□□□ -2.07
CDH9Q9ULB4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CDH9Q9ULB4 RNU6-1025P-201ENST00000410629 104 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 RNU2-63P-201ENST00000410792 194 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC118469.1-201ENST00000442943 488 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 MTND1P12-201ENST00000455231 147 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC112771.1-201ENST00000463581 102 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC090515.1-201ENST00000465295 476 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 RPS3AP22-201ENST00000488297 769 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 TPT1P8-201ENST00000510120 555 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 RNU7-193P-201ENST00000516723 65 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 MIR514B-201ENST00000516774 80 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 MTND2P32-201ENST00000521584 1038 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC011979.2-201ENST00000527568 352 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC079598.5-201ENST00000547460 117 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 MIR3118-1-201ENST00000581787 76 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC009314.1-201ENST00000603871 304 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AL161423.1-201ENST00000613700 262 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AC091953.2-201ENST00000623979 160 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 AL359851.1-201ENST00000569460 4997 ntBASIC2.11□□□□□ -2.07
CDH9Q9ULB4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 RNU6-190P-201ENST00000384154 102 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 RNU6-166P-201ENST00000384371 107 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AC092809.3-201ENST00000415453 231 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 RPL7P34-201ENST00000433316 712 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AL353706.1-201ENST00000436728 494 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 GPM6BP3-201ENST00000442797 145 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 Z73417.1-201ENST00000447373 778 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AC003071.1-201ENST00000451219 789 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 FAM92A1P2-202ENST00000504766 877 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AP001372.4-201ENST00000524889 472 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 MTND4LP18-201ENST00000526864 291 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 ZNF519P3-201ENST00000557158 1032 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 MIR1273C-201ENST00000578669 77 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 MIR5089-201ENST00000580047 84 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AL670379.10-201ENST00000604330 253 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AL670379.9-201ENST00000605428 253 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 RNU6-91P-201ENST00000607774 107 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AP000240.1-201ENST00000609910 452 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 AC009318.2-201ENST00000610917 651 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 MIR5739-201ENST00000619803 80 ntBASIC2.1□□□□□ -2.07
CDH9Q9ULB4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CDH9Q9ULB4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
CDH9Q9ULB4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDH9Q9ULB4 Y_RNA.33-201ENST00000362591 102 ntBASIC2.09□□□□□ -2.07
CDH9Q9ULB4 RNU1-72P-201ENST00000362976 153 ntBASIC2.09□□□□□ -2.07
CDH9Q9ULB4 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
CDH9Q9ULB4 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
CDH9Q9ULB4 AC019129.1-201ENST00000403786 261 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms