Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 AC090617.7-201ENST00000623952 126 ntBASIC3.65□□□□□ -1.83
CDC42EP3Q9UKI2 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.65□□□□□ -1.83
CDC42EP3Q9UKI2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.65□□□□□ -1.83
CDC42EP3Q9UKI2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.65□□□□□ -1.83
CDC42EP3Q9UKI2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
CDC42EP3Q9UKI2 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.65□□□□□ -1.83
CDC42EP3Q9UKI2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.65□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-770P-201ENST00000363929 105 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.257-201ENST00000364596 102 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-336P-201ENST00000364891 107 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RNU5E-7P-201ENST00000365290 117 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RNA5SP283-201ENST00000365604 119 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 SNORA51.11-201ENST00000384442 131 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 CYCSP19-201ENST00000411715 316 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 MTND3P9-201ENST00000429526 346 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AL117339.2-201ENST00000430475 180 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC007389.2-201ENST00000434630 306 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 ISCUP1-201ENST00000454451 448 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 SNORD127-201ENST00000458892 86 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RN7SKP210-201ENST00000459176 261 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RPL30P5-201ENST00000494923 336 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC006499.6-201ENST00000511169 607 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-1282P-201ENST00000516735 96 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-388P-201ENST00000517012 105 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-389P-201ENST00000517048 105 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC034114.1-201ENST00000520293 285 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AL590705.4-201ENST00000532209 134 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 TVP23BP1-201ENST00000557500 617 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 CYCSP39-201ENST00000565821 309 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC005255.1-201ENST00000593748 216 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC004825.2-201ENST00000616634 455 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 SCARNA4-202ENST00000625402 129 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AC243829.7-201ENST00000633081 225 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 U2.21-201ENST00000637295 81 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 AP000560.1-201ENST00000624150 1937 ntBASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.64□□□□□ -1.83
CDC42EP3Q9UKI2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 OR56A5-201ENST00000340110 738 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.26-201ENST00000362539 101 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-78P-201ENST00000362897 107 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.376-201ENST00000365638 108 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 Z98749.2-208ENST00000381646 500 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-217P-201ENST00000384164 104 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.461-201ENST00000384263 103 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-611P-201ENST00000384276 104 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-140P-201ENST00000384566 108 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 CRYBB2P1-203ENST00000415709 538 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AL356968.1-201ENST00000416622 474 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-1132P-201ENST00000459214 107 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-897P-201ENST00000517135 105 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AC107016.1-201ENST00000550463 337 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AC104581.2-201ENST00000572227 430 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AC053481.4-201ENST00000583164 216 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AL390123.1-201ENST00000603216 237 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AC022336.2-201ENST00000568966 2538 ntBASIC3.63□□□□□ -1.83
CDC42EP3Q9UKI2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 SNORA31-201ENST00000362607 130 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 Y_RNA.64-201ENST00000362845 102 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 RNU6-806P-201ENST00000365147 105 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 MIR3065-201ENST00000390137 79 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 MIR1302-6-201ENST00000408466 90 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 RPS6P12-201ENST00000432491 726 ntBASIC3.62□□□□□ -1.83
CDC42EP3Q9UKI2 VDAC1P3-201ENST00000434069 851 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms