Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 FAM92A1P2-202ENST00000504766 877 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 MRPS36P2-201ENST00000512569 299 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC007621.1-201ENST00000604544 437 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AL035413.2-201ENST00000604801 525 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC092954.2-201ENST00000609103 430 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 MIR6134-201ENST00000617606 109 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AL354950.2-201ENST00000617939 290 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC093536.2-201ENST00000565257 1406 ntBASIC3.01□□□□□ -1.93
LIMA1Q9UHB6 AC010889.1-201ENST00000566193 2666 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3□□□□□ -1.93
LIMA1Q9UHB6 MIR422A-201ENST00000362286 90 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 SNORD14B-201ENST00000364533 90 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 RNU6-898P-201ENST00000365627 104 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 SNORD21-201ENST00000383953 95 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 Y_RNA.481-201ENST00000384373 102 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 MIR592-201ENST00000384959 97 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AL122016.1-201ENST00000403365 367 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3□□□□□ -1.93
LIMA1Q9UHB6 RPL7P10-201ENST00000417407 739 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 ATG3P1-201ENST00000419507 911 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AL139281.1-201ENST00000422120 335 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AL358075.3-201ENST00000426289 226 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AL627311.1-201ENST00000431514 115 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 MTND3P21-201ENST00000433774 331 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC016691.1-201ENST00000441321 413 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 NDUFB1P2-201ENST00000449477 176 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC233279.1-201ENST00000455300 423 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 BX510359.1-201ENST00000456973 237 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC083798.1-201ENST00000472671 131 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC090525.1-201ENST00000479116 478 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC019235.1-201ENST00000503847 207 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 MTCO3P9-201ENST00000506989 781 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 SLC25A15P5-201ENST00000508033 253 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC009646.1-201ENST00000510455 318 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC113155.1-201ENST00000511141 769 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AL117351.2-201ENST00000513571 157 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 SNORA74D-201ENST00000516404 141 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 RNU6-1178P-201ENST00000516674 107 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3□□□□□ -1.93
LIMA1Q9UHB6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3□□□□□ -1.93
LIMA1Q9UHB6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3□□□□□ -1.93
LIMA1Q9UHB6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3□□□□□ -1.93
LIMA1Q9UHB6 AL121821.2-201ENST00000556081 394 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 LINC00933-203ENST00000559812 219 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC012493.2-201ENST00000595083 291 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC073539.2-201ENST00000597113 165 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 BNIP3P30-201ENST00000601184 574 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC068137.3-201ENST00000639191 341 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC073869.6-201ENST00000640656 341 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 AC027514.1-201ENST00000588561 1603 ntBASIC3□□□□□ -1.93
LIMA1Q9UHB6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
LIMA1Q9UHB6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3□□□□□ -1.93
LIMA1Q9UHB6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 Y_RNA.255-201ENST00000364581 97 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 MIR518D-201ENST00000385014 87 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 RNU6-780P-201ENST00000391030 104 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL592148.1-201ENST00000413568 445 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL669831.1-202ENST00000428504 417 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL139132.1-201ENST00000431587 344 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 GTF2IP13-201ENST00000438487 386 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL161651.1-201ENST00000440882 223 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC092001.1-201ENST00000453012 261 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 BTF3P15-201ENST00000455606 336 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 SNRPFP3-201ENST00000457792 225 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 RPS27AP9-201ENST00000477681 438 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 RPL31P41-201ENST00000477967 372 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AF213884.2-201ENST00000510417 903 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC104136.1-201ENST00000512969 394 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 SNORD19.2-201ENST00000516978 73 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 HIF1AP1-201ENST00000553642 175 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC027807.1-201ENST00000559921 996 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 TPRKBP2-201ENST00000565969 475 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC011471.1-201ENST00000585766 187 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC020895.1-201ENST00000595362 272 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AL645944.1-201ENST00000603857 493 ntBASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LIMA1Q9UHB6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms