Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 RN7SKP223-201ENST00000410582 62 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AL135786.1-201ENST00000415892 214 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 Z99497.1-201ENST00000421282 135 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 MED14P1-201ENST00000430517 648 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 SNRPEP9-201ENST00000436794 238 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AC116353.2-201ENST00000505332 712 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 ARL2BPP4-201ENST00000506854 471 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 RNA5SP290-201ENST00000517133 127 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 IGLV3-17-201ENST00000519099 244 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 TPRKBP2-201ENST00000565969 475 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AC092325.1-201ENST00000566449 554 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 MIR5007-201ENST00000583098 95 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 NDUFA8P1-201ENST00000605525 367 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AP001596.2-201ENST00000608410 312 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 MIR7844-201ENST00000616161 122 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 AL157786.1-207ENST00000627771 695 ntBASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.7□□□□□ -1.98
CLIP2Q9UDT6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 RNU6-278P-201ENST00000390945 109 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC078974.1-201ENST00000411597 223 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 ZNF90P2-204ENST00000419323 1075 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AL356320.1-201ENST00000429616 163 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC018634.1-201ENST00000437554 401 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AL353705.4-201ENST00000449661 238 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 RPL26P9-201ENST00000457466 433 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 MTAPP1-201ENST00000489154 819 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 SNORA31.3-201ENST00000516029 96 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 RNU6-1003P-201ENST00000517099 105 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC121758.2-201ENST00000553271 193 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 MIR4528-201ENST00000577763 90 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AL356280.1-201ENST00000603614 379 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 MTND4LP5-201ENST00000605152 292 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC107214.2-201ENST00000608204 634 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 U6atac.1-201ENST00000616025 117 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AL449363.1-201ENST00000617815 186 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC005609.4-201ENST00000625071 447 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 U2.21-201ENST00000637295 81 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 AC099654.12-201ENST00000639868 649 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 TEX21P-201ENST00000447107 1476 ntBASIC2.69□□□□□ -1.98
CLIP2Q9UDT6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 RNU6-1167P-201ENST00000363227 94 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 RNU6-443P-201ENST00000384780 107 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AL139397.2-201ENST00000404529 772 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 USP9YP27-201ENST00000418455 438 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 DPH3P2-201ENST00000422618 250 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AL512286.1-201ENST00000439244 400 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 MTND4P25-201ENST00000441039 533 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 MTCO3P38-201ENST00000468910 766 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 RPS29P21-201ENST00000496272 170 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 MIR3913-1-201ENST00000577744 102 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AC068276.1-201ENST00000605793 379 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 OR10AB1P-201ENST00000609613 938 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AL589743.7-201ENST00000612637 233 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 AC025048.6-202ENST00000627667 438 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 SEPT14P19-203ENST00000633205 211 ntBASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CLIP2Q9UDT6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms