Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RPS3AP3-201ENST00000411933 242 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 OR51A5P-201ENST00000415429 942 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC007560.1-201ENST00000426912 237 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MICF-203ENST00000432679 129 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AL078601.1-201ENST00000444542 271 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AL441985.1-201ENST00000457727 251 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 snoU109.1-201ENST00000459339 135 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 RPL9P6-201ENST00000492764 598 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC117522.1-201ENST00000509821 380 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 SNORA31.6-201ENST00000516241 130 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 IGKV3-31-201ENST00000523109 329 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 OR5B19P-201ENST00000531766 928 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC005771.1-201ENST00000585581 349 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC068276.1-201ENST00000605793 379 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AL133173.2-201ENST00000614270 90 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC008250.2-201ENST00000615261 205 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MIR7157-201ENST00000635801 60 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 MTND5P30-201ENST00000452896 1731 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 AC080128.1-201ENST00000474389 1917 ntBASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.99□□□□□ -2.09
CLCF1Q9UBD9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 CDC27P3-201ENST00000635418 1910 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 RNU6-1280P-201ENST00000365211 107 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 RNU1-51P-201ENST00000365345 176 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 Z98749.2-208ENST00000381646 500 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 MIR144-201ENST00000384886 86 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 SNORA40C-201ENST00000391285 128 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 SNORA26.8-201ENST00000391306 124 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 HMGN1P14-201ENST00000412459 517 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 MTND2P18-201ENST00000419962 1030 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AL136380.1-201ENST00000447970 162 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC092001.1-201ENST00000453012 261 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AL033528.1-201ENST00000453780 140 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 BTF3P15-201ENST00000455606 336 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AL121769.1-201ENST00000469473 401 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 RNU6-581P-201ENST00000516214 105 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 IGLV3-17-201ENST00000519099 244 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC022616.3-201ENST00000523940 148 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 ADI1P3-201ENST00000549509 470 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 PRELID2P1-201ENST00000552837 301 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AL158032.1-201ENST00000605401 106 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AL139286.2-201ENST00000606838 396 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AL449363.1-201ENST00000617815 186 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AL603839.4-201ENST00000624658 1005 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 PISRT1-201ENST00000626175 531 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 AC092881.1-201ENST00000638218 2733 ntBASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLCF1Q9UBD9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 U8.3-201ENST00000363321 132 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 RNU4-91P-201ENST00000364778 135 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 RNY4P34-201ENST00000364779 95 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 RNU6-641P-201ENST00000384006 107 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 SNORA40.3-201ENST00000390964 122 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC114491.1-201ENST00000416095 246 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AC104850.1-201ENST00000435940 476 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 FABP5P14-201ENST00000437273 393 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 RNA5SP269-201ENST00000459032 137 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 MTCO2P6-201ENST00000463134 685 ntBASIC1.97□□□□□ -2.09
CLCF1Q9UBD9 MTND3P7-201ENST00000474435 343 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms