Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR622-201ENST00000638396 96 ntBASIC3.54□□□□□ -1.84
COL20A1Q9P218 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL20A1Q9P218 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL20A1Q9P218 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 Y_RNA.414-201ENST00000384011 101 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 SNORA40C-201ENST00000391285 128 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 MTND3P8-201ENST00000412909 339 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC007560.1-201ENST00000426912 237 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 TOMM20P4-201ENST00000427861 435 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AL627311.1-201ENST00000431514 115 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AL365400.1-201ENST00000431854 640 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 MTND4LP16-201ENST00000440828 295 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AL078601.1-201ENST00000444542 271 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 MTATP6P7-201ENST00000453315 681 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AL136097.1-201ENST00000456945 913 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 RNU1-143P-201ENST00000516296 146 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 RNU6-875P-201ENST00000516488 106 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 RNU6-703P-201ENST00000516946 107 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 SNORA31.19-201ENST00000517079 126 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC009812.2-201ENST00000517657 457 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC107953.1-201ENST00000522216 297 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 NACAP3-201ENST00000552100 481 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC005668.1-201ENST00000571142 476 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 MIR4782-201ENST00000577987 79 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC007938.3-201ENST00000604965 623 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 U1.23-201ENST00000610293 146 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 RNU1-68P-201ENST00000615382 146 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 RMST_4.1-201ENST00000616886 107 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 U1.39-201ENST00000621562 146 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC092628.2-201ENST00000622492 339 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC006386.2-201ENST00000624491 75 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC012005.1-201ENST00000624575 75 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC099654.5-201ENST00000636479 350 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.53□□□□□ -1.84
COL20A1Q9P218 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL20A1Q9P218 MTND5P7-201ENST00000413558 1798 ntBASIC3.53□□□□□ -1.84
COL20A1Q9P218 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
COL20A1Q9P218 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL20A1Q9P218 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL20A1Q9P218 AC093908.1-201ENST00000623125 8092 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
COL20A1Q9P218 Y_RNA.167-201ENST00000363735 109 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.52□□□□□ -1.85
COL20A1Q9P218 SNORD15B-201ENST00000384714 146 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 MIR34A-201ENST00000385130 110 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 Y_RNA.623-201ENST00000411128 95 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 RNA5SP31-201ENST00000411144 127 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 NDUFS5P4-201ENST00000412983 318 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 NCOR1P3-201ENST00000420479 303 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 HMGN2P20-201ENST00000437531 273 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.52□□□□□ -1.85
COL20A1Q9P218 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.52□□□□□ -1.85
COL20A1Q9P218 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.52□□□□□ -1.85
COL20A1Q9P218 AC091951.2-201ENST00000500762 203 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL20A1Q9P218 AC022080.3-201ENST00000544433 482 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 MIR3186-201ENST00000577404 85 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.52□□□□□ -1.85
COL20A1Q9P218 LARP7P1-201ENST00000605576 316 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.52□□□□□ -1.85
COL20A1Q9P218 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.52□□□□□ -1.85
COL20A1Q9P218 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL20A1Q9P218 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL20A1Q9P218 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL20A1Q9P218 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.52□□□□□ -1.85
COL20A1Q9P218 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL20A1Q9P218 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL20A1Q9P218 SRP72P2-201ENST00000344851 1979 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC007256.1-201ENST00000392253 2765 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC073325.2-201ENST00000339545 159 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 Y_RNA.70-201ENST00000362886 110 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 RNU6-884P-201ENST00000363889 107 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 SNORA80A-201ENST00000363922 136 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 MIR184-201ENST00000384962 84 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC099548.1-201ENST00000421443 426 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 HMGB1P9-201ENST00000429856 646 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC093019.1-201ENST00000443135 252 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 AL583843.1-201ENST00000456070 346 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC092798.1-201ENST00000458542 409 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC128713.1-201ENST00000471495 306 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 RPS29P26-201ENST00000477483 171 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.51□□□□□ -1.85
COL20A1Q9P218 TBCAP3-201ENST00000512475 312 ntBASIC3.51□□□□□ -1.85
COL20A1Q9P218 RNU4-49P-201ENST00000516080 140 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms